Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nub1P54729 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nub1P54729 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nub1P54729 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nub1P54729 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.29□□□□□ -0.12
Nub1P54729 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Nub1P54729 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.29□□□□□ -0.12
Nub1P54729 Gm8463-201ENSMUST00000208573 613 ntBASIC14.29□□□□□ -0.12
Nub1P54729 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nub1P54729 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nub1P54729 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nub1P54729 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nub1P54729 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Nub1P54729 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nub1P54729 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nub1P54729 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nub1P54729 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.29□□□□□ -0.12
Nub1P54729 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
Nub1P54729 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nub1P54729 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nub1P54729 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nub1P54729 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nub1P54729 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.28□□□□□ -0.12
Nub1P54729 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nub1P54729 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nub1P54729 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nub1P54729 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nub1P54729 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nub1P54729 Gm12928-201ENSMUST00000117115 573 ntBASIC14.28□□□□□ -0.12
Nub1P54729 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.28□□□□□ -0.12
Nub1P54729 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nub1P54729 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nub1P54729 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nub1P54729 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.28□□□□□ -0.12
Nub1P54729 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.28□□□□□ -0.12
Nub1P54729 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nub1P54729 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.28□□□□□ -0.12
Nub1P54729 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nub1P54729 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.28□□□□□ -0.12
Nub1P54729 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.28□□□□□ -0.12
Nub1P54729 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.28□□□□□ -0.12
Nub1P54729 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.28□□□□□ -0.12
Nub1P54729 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.28□□□□□ -0.12
Nub1P54729 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nub1P54729 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nub1P54729 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nub1P54729 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.28□□□□□ -0.12
Nub1P54729 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nub1P54729 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.28□□□□□ -0.12
Nub1P54729 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nub1P54729 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nub1P54729 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nub1P54729 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nub1P54729 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nub1P54729 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nub1P54729 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nub1P54729 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nub1P54729 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.27□□□□□ -0.12
Nub1P54729 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Nub1P54729 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.27□□□□□ -0.12
Nub1P54729 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nub1P54729 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.27□□□□□ -0.12
Nub1P54729 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nub1P54729 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.27□□□□□ -0.12
Nub1P54729 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.27□□□□□ -0.12
Nub1P54729 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nub1P54729 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Nub1P54729 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nub1P54729 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.27□□□□□ -0.13
Nub1P54729 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nub1P54729 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.27□□□□□ -0.13
Nub1P54729 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nub1P54729 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Nub1P54729 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.27□□□□□ -0.13
Nub1P54729 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.27□□□□□ -0.13
Nub1P54729 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.27□□□□□ -0.13
Nub1P54729 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.27□□□□□ -0.13
Nub1P54729 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nub1P54729 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nub1P54729 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.27□□□□□ -0.13
Nub1P54729 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nub1P54729 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nub1P54729 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nub1P54729 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nub1P54729 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nub1P54729 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nub1P54729 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nub1P54729 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Nub1P54729 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nub1P54729 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nub1P54729 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC14.27□□□□□ -0.13
Nub1P54729 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nub1P54729 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nub1P54729 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nub1P54729 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nub1P54729 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nub1P54729 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Nub1P54729 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nub1P54729 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nub1P54729 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms