Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm9176-201ENSMUST00000219955 1120 ntBASIC14.83□□□□□ -0.03
Col2a1P28481 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC14.83□□□□□ -0.03
Col2a1P28481 AC093022.1-201ENSMUST00000226949 1072 ntBASIC14.83□□□□□ -0.03
Col2a1P28481 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col2a1P28481 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col2a1P28481 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col2a1P28481 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Col2a1P28481 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.83□□□□□ -0.03
Col2a1P28481 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col2a1P28481 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col2a1P28481 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col2a1P28481 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col2a1P28481 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC14.83□□□□□ -0.04
Col2a1P28481 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC14.83□□□□□ -0.04
Col2a1P28481 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Col2a1P28481 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Col2a1P28481 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.83□□□□□ -0.04
Col2a1P28481 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col2a1P28481 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.83□□□□□ -0.04
Col2a1P28481 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col2a1P28481 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Col2a1P28481 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col2a1P28481 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Col2a1P28481 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col2a1P28481 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col2a1P28481 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col2a1P28481 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col2a1P28481 Gm15547-201ENSMUST00000122152 333 ntBASIC14.82□□□□□ -0.04
Col2a1P28481 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col2a1P28481 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Col2a1P28481 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col2a1P28481 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.82□□□□□ -0.04
Col2a1P28481 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col2a1P28481 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col2a1P28481 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col2a1P28481 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Col2a1P28481 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col2a1P28481 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col2a1P28481 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Col2a1P28481 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col2a1P28481 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Col2a1P28481 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Col2a1P28481 Gm6015-201ENSMUST00000217493 1586 ntBASIC14.82□□□□□ -0.04
Col2a1P28481 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col2a1P28481 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col2a1P28481 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col2a1P28481 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Col2a1P28481 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col2a1P28481 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col2a1P28481 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col2a1P28481 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col2a1P28481 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col2a1P28481 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col2a1P28481 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col2a1P28481 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col2a1P28481 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col2a1P28481 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Col2a1P28481 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col2a1P28481 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col2a1P28481 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col2a1P28481 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Col2a1P28481 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC14.82□□□□□ -0.04
Col2a1P28481 Gm11930-201ENSMUST00000117788 190 ntBASIC14.82□□□□□ -0.04
Col2a1P28481 Gm14109-201ENSMUST00000118814 309 ntBASIC14.82□□□□□ -0.04
Col2a1P28481 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC14.82□□□□□ -0.04
Col2a1P28481 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col2a1P28481 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC14.82□□□□□ -0.04
Col2a1P28481 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC14.82□□□□□ -0.04
Col2a1P28481 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.82□□□□□ -0.04
Col2a1P28481 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.82□□□□□ -0.04
Col2a1P28481 Gm39404-201ENSMUST00000216350 313 ntBASIC14.82□□□□□ -0.04
Col2a1P28481 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col2a1P28481 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col2a1P28481 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col2a1P28481 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC14.82□□□□□ -0.04
Col2a1P28481 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col2a1P28481 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col2a1P28481 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col2a1P28481 Gm8862-201ENSMUST00000198379 1346 ntBASIC14.81□□□□□ -0.04
Col2a1P28481 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col2a1P28481 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col2a1P28481 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col2a1P28481 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col2a1P28481 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Col2a1P28481 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col2a1P28481 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col2a1P28481 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col2a1P28481 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col2a1P28481 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Col2a1P28481 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col2a1P28481 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Col2a1P28481 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Col2a1P28481 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col2a1P28481 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col2a1P28481 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Col2a1P28481 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col2a1P28481 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Col2a1P28481 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col2a1P28481 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col2a1P28481 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms