Protein–RNA interactions for Protein: P13438

Tpbpa, Trophoblast-specific protein alpha, mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpaP13438 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TpbpaP13438 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TpbpaP13438 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.02□□□□□ -0.49
TpbpaP13438 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
TpbpaP13438 Gm27430-201ENSMUST00000184585 107 ntBASIC12.02□□□□□ -0.49
TpbpaP13438 Gm44333-201ENSMUST00000197168 107 ntBASIC12.02□□□□□ -0.49
TpbpaP13438 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TpbpaP13438 Gm5312-201ENSMUST00000203728 547 ntBASIC12.02□□□□□ -0.49
TpbpaP13438 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TpbpaP13438 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
TpbpaP13438 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
TpbpaP13438 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
TpbpaP13438 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TpbpaP13438 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TpbpaP13438 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TpbpaP13438 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.02□□□□□ -0.49
TpbpaP13438 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TpbpaP13438 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.02□□□□□ -0.49
TpbpaP13438 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TpbpaP13438 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TpbpaP13438 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
TpbpaP13438 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TpbpaP13438 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TpbpaP13438 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TpbpaP13438 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TpbpaP13438 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
TpbpaP13438 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TpbpaP13438 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TpbpaP13438 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TpbpaP13438 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TpbpaP13438 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TpbpaP13438 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TpbpaP13438 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.01□□□□□ -0.49
TpbpaP13438 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
TpbpaP13438 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
TpbpaP13438 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.01□□□□□ -0.49
TpbpaP13438 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TpbpaP13438 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TpbpaP13438 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TpbpaP13438 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TpbpaP13438 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TpbpaP13438 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TpbpaP13438 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TpbpaP13438 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TpbpaP13438 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TpbpaP13438 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.01□□□□□ -0.49
TpbpaP13438 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TpbpaP13438 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
TpbpaP13438 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.01□□□□□ -0.49
TpbpaP13438 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TpbpaP13438 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TpbpaP13438 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
TpbpaP13438 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
TpbpaP13438 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.01□□□□□ -0.49
TpbpaP13438 Gm28630-201ENSMUST00000187806 498 ntBASIC12.01□□□□□ -0.49
TpbpaP13438 Gm2756-201ENSMUST00000195851 400 ntBASIC12.01□□□□□ -0.49
TpbpaP13438 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
TpbpaP13438 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
TpbpaP13438 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TpbpaP13438 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TpbpaP13438 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TpbpaP13438 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TpbpaP13438 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TpbpaP13438 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TpbpaP13438 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TpbpaP13438 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TpbpaP13438 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TpbpaP13438 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TpbpaP13438 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TpbpaP13438 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TpbpaP13438 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
TpbpaP13438 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TpbpaP13438 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
TpbpaP13438 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TpbpaP13438 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TpbpaP13438 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12□□□□□ -0.49
TpbpaP13438 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
TpbpaP13438 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TpbpaP13438 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TpbpaP13438 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TpbpaP13438 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TpbpaP13438 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TpbpaP13438 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TpbpaP13438 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TpbpaP13438 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12□□□□□ -0.49
TpbpaP13438 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12□□□□□ -0.49
TpbpaP13438 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12□□□□□ -0.49
TpbpaP13438 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12□□□□□ -0.49
TpbpaP13438 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12□□□□□ -0.49
TpbpaP13438 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12□□□□□ -0.49
TpbpaP13438 Gm24420-201ENSMUST00000176676 59 ntBASIC12□□□□□ -0.49
TpbpaP13438 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12□□□□□ -0.49
TpbpaP13438 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12□□□□□ -0.49
TpbpaP13438 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12□□□□□ -0.49
TpbpaP13438 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12□□□□□ -0.49
TpbpaP13438 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12□□□□□ -0.49
TpbpaP13438 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TpbpaP13438 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TpbpaP13438 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TpbpaP13438 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms