Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc8P09025 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC14□□□□□ -0.17
Hoxc8P09025 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc8P09025 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hoxc8P09025 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc8P09025 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc8P09025 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc8P09025 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc8P09025 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc8P09025 Gm9025-201ENSMUST00000122415 1575 ntBASIC14□□□□□ -0.17
Hoxc8P09025 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14□□□□□ -0.17
Hoxc8P09025 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Hoxc8P09025 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc8P09025 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc8P09025 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hoxc8P09025 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc8P09025 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.99□□□□□ -0.17
Hoxc8P09025 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc8P09025 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc8P09025 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc8P09025 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc8P09025 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc8P09025 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc8P09025 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Hoxc8P09025 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc8P09025 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc8P09025 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc8P09025 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc8P09025 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc8P09025 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc8P09025 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC13.99□□□□□ -0.17
Hoxc8P09025 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc8P09025 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc8P09025 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc8P09025 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc8P09025 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc8P09025 Gm13665-201ENSMUST00000120830 528 ntBASIC13.99□□□□□ -0.17
Hoxc8P09025 Gm15547-201ENSMUST00000122152 333 ntBASIC13.99□□□□□ -0.17
Hoxc8P09025 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc8P09025 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Hoxc8P09025 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc8P09025 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc8P09025 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc8P09025 Gm2260-201ENSMUST00000184965 657 ntBASIC13.99□□□□□ -0.17
Hoxc8P09025 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.99□□□□□ -0.17
Hoxc8P09025 Rps4l-202ENSMUST00000204242 789 ntBASIC13.99□□□□□ -0.17
Hoxc8P09025 AC155637.1-201ENSMUST00000218560 636 ntBASIC13.99□□□□□ -0.17
Hoxc8P09025 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC13.99□□□□□ -0.17
Hoxc8P09025 Gm8712-201ENSMUST00000221090 701 ntBASIC13.99□□□□□ -0.17
Hoxc8P09025 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc8P09025 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc8P09025 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc8P09025 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc8P09025 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc8P09025 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc8P09025 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc8P09025 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc8P09025 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.99□□□□□ -0.17
Hoxc8P09025 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc8P09025 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc8P09025 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc8P09025 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc8P09025 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc8P09025 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc8P09025 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc8P09025 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc8P09025 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc8P09025 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Hoxc8P09025 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc8P09025 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc8P09025 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc8P09025 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc8P09025 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc8P09025 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.98□□□□□ -0.17
Hoxc8P09025 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc8P09025 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Hoxc8P09025 Mir874-201ENSMUST00000104769 76 ntBASIC13.98□□□□□ -0.17
Hoxc8P09025 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc8P09025 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Hoxc8P09025 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.98□□□□□ -0.17
Hoxc8P09025 Gm11439-201ENSMUST00000118598 409 ntBASIC13.98□□□□□ -0.17
Hoxc8P09025 Gm14109-201ENSMUST00000118814 309 ntBASIC13.98□□□□□ -0.17
Hoxc8P09025 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.98□□□□□ -0.17
Hoxc8P09025 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc8P09025 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.98□□□□□ -0.17
Hoxc8P09025 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Hoxc8P09025 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.98□□□□□ -0.17
Hoxc8P09025 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc8P09025 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc8P09025 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.98□□□□□ -0.17
Hoxc8P09025 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc8P09025 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc8P09025 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc8P09025 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc8P09025 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc8P09025 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc8P09025 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc8P09025 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc8P09025 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc8P09025 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms