Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.04□□□□□ -0.48
Matn3O35701 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.04□□□□□ -0.48
Matn3O35701 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.04□□□□□ -0.48
Matn3O35701 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Matn3O35701 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Matn3O35701 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.04□□□□□ -0.48
Matn3O35701 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Matn3O35701 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Matn3O35701 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.04□□□□□ -0.48
Matn3O35701 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Matn3O35701 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.04□□□□□ -0.48
Matn3O35701 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Matn3O35701 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.04□□□□□ -0.48
Matn3O35701 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Matn3O35701 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Matn3O35701 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Matn3O35701 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Matn3O35701 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Matn3O35701 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.03□□□□□ -0.48
Matn3O35701 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Matn3O35701 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Matn3O35701 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Matn3O35701 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Matn3O35701 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Matn3O35701 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Matn3O35701 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Matn3O35701 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Matn3O35701 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Matn3O35701 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.03□□□□□ -0.48
Matn3O35701 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Matn3O35701 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Matn3O35701 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Matn3O35701 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Matn3O35701 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.03□□□□□ -0.48
Matn3O35701 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Matn3O35701 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Matn3O35701 Gm27494-201ENSMUST00000184735 189 ntBASIC12.03□□□□□ -0.48
Matn3O35701 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.03□□□□□ -0.48
Matn3O35701 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Matn3O35701 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.03□□□□□ -0.48
Matn3O35701 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.03□□□□□ -0.48
Matn3O35701 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Matn3O35701 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Matn3O35701 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.03□□□□□ -0.48
Matn3O35701 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Matn3O35701 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Matn3O35701 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
Matn3O35701 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.03□□□□□ -0.48
Matn3O35701 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Matn3O35701 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Matn3O35701 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Matn3O35701 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Matn3O35701 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Matn3O35701 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Matn3O35701 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Matn3O35701 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Matn3O35701 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Matn3O35701 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Matn3O35701 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Matn3O35701 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.03□□□□□ -0.48
Matn3O35701 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Matn3O35701 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Matn3O35701 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Matn3O35701 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Matn3O35701 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.48
Matn3O35701 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.48
Matn3O35701 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Matn3O35701 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Matn3O35701 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.02□□□□□ -0.48
Matn3O35701 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Matn3O35701 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Matn3O35701 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.02□□□□□ -0.48
Matn3O35701 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Matn3O35701 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Matn3O35701 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Matn3O35701 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Matn3O35701 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.02□□□□□ -0.49
Matn3O35701 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Matn3O35701 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Matn3O35701 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Matn3O35701 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.02□□□□□ -0.49
Matn3O35701 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Matn3O35701 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Matn3O35701 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Matn3O35701 Mir7221-201ENSMUST00000184009 72 ntBASIC12.02□□□□□ -0.49
Matn3O35701 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.02□□□□□ -0.49
Matn3O35701 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.02□□□□□ -0.49
Matn3O35701 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.02□□□□□ -0.49
Matn3O35701 Gm44872-201ENSMUST00000207864 420 ntBASIC12.02□□□□□ -0.49
Matn3O35701 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.02□□□□□ -0.49
Matn3O35701 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Matn3O35701 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.02□□□□□ -0.49
Matn3O35701 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Matn3O35701 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.02□□□□□ -0.49
Matn3O35701 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Matn3O35701 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Matn3O35701 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Matn3O35701 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Matn3O35701 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Matn3O35701 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms