Protein–RNA interactions for Protein: F2Z3U3

Raph1, Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, mousemouse

Predictions only

Length 1,266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raph1F2Z3U3 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Raph1F2Z3U3 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Raph1F2Z3U3 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Raph1F2Z3U3 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Raph1F2Z3U3 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Raph1F2Z3U3 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Raph1F2Z3U3 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Raph1F2Z3U3 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Raph1F2Z3U3 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Gm13323-201ENSMUST00000120245 1151 ntBASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Mir6956-201ENSMUST00000183598 62 ntBASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Gm18766-201ENSMUST00000189811 808 ntBASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Raph1F2Z3U3 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Raph1F2Z3U3 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.17□□□□□ -0.3
Raph1F2Z3U3 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Raph1F2Z3U3 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.17□□□□□ -0.3
Raph1F2Z3U3 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Raph1F2Z3U3 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Raph1F2Z3U3 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Raph1F2Z3U3 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Raph1F2Z3U3 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Raph1F2Z3U3 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Raph1F2Z3U3 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.17□□□□□ -0.3
Raph1F2Z3U3 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Raph1F2Z3U3 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Raph1F2Z3U3 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Raph1F2Z3U3 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Raph1F2Z3U3 Gm5566-201ENSMUST00000116118 459 ntBASIC13.17□□□□□ -0.3
Raph1F2Z3U3 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.17□□□□□ -0.3
Raph1F2Z3U3 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.17□□□□□ -0.3
Raph1F2Z3U3 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Raph1F2Z3U3 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Raph1F2Z3U3 Gm8927-201ENSMUST00000181978 981 ntBASIC13.17□□□□□ -0.3
Raph1F2Z3U3 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Raph1F2Z3U3 Gm29541-201ENSMUST00000191351 678 ntBASIC13.17□□□□□ -0.3
Raph1F2Z3U3 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.17□□□□□ -0.3
Raph1F2Z3U3 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Raph1F2Z3U3 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.17□□□□□ -0.3
Raph1F2Z3U3 Gm8396-201ENSMUST00000057361 823 ntBASIC13.17□□□□□ -0.3
Raph1F2Z3U3 Gm3222-201ENSMUST00000071282 990 ntBASIC13.17□□□□□ -0.3
Raph1F2Z3U3 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.17□□□□□ -0.3
Raph1F2Z3U3 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Raph1F2Z3U3 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Raph1F2Z3U3 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.17□□□□□ -0.3
Raph1F2Z3U3 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Raph1F2Z3U3 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Raph1F2Z3U3 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Raph1F2Z3U3 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.17□□□□□ -0.3
Raph1F2Z3U3 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Raph1F2Z3U3 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Raph1F2Z3U3 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Raph1F2Z3U3 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Raph1F2Z3U3 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Raph1F2Z3U3 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms