Protein–RNA interactions for Protein: B4XVP9

Phf11c, PHD finger protein 11C, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf11cB4XVP9 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Phf11cB4XVP9 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Phf11cB4XVP9 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Phf11cB4XVP9 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Phf11cB4XVP9 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Phf11cB4XVP9 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Phf11cB4XVP9 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Phf11cB4XVP9 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Phf11cB4XVP9 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Phf11cB4XVP9 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Phf11cB4XVP9 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Phf11cB4XVP9 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Phf11cB4XVP9 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Phf11cB4XVP9 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Phf11cB4XVP9 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.57□□□□□ -0.4
Phf11cB4XVP9 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.56□□□□□ -0.4
Phf11cB4XVP9 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Phf11cB4XVP9 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Phf11cB4XVP9 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Phf11cB4XVP9 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Phf11cB4XVP9 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Phf11cB4XVP9 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Phf11cB4XVP9 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Phf11cB4XVP9 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.56□□□□□ -0.4
Phf11cB4XVP9 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.56□□□□□ -0.4
Phf11cB4XVP9 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Phf11cB4XVP9 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Phf11cB4XVP9 Gm14767-201ENSMUST00000121559 586 ntBASIC12.56□□□□□ -0.4
Phf11cB4XVP9 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Phf11cB4XVP9 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.56□□□□□ -0.4
Phf11cB4XVP9 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Phf11cB4XVP9 Gm27680-201ENSMUST00000184192 160 ntBASIC12.56□□□□□ -0.4
Phf11cB4XVP9 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.56□□□□□ -0.4
Phf11cB4XVP9 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.56□□□□□ -0.4
Phf11cB4XVP9 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Phf11cB4XVP9 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.56□□□□□ -0.4
Phf11cB4XVP9 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.56□□□□□ -0.4
Phf11cB4XVP9 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Phf11cB4XVP9 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Phf11cB4XVP9 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Phf11cB4XVP9 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Phf11cB4XVP9 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Phf11cB4XVP9 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.56□□□□□ -0.4
Phf11cB4XVP9 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Phf11cB4XVP9 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Phf11cB4XVP9 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Phf11cB4XVP9 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Phf11cB4XVP9 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Phf11cB4XVP9 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Phf11cB4XVP9 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Phf11cB4XVP9 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Phf11cB4XVP9 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Phf11cB4XVP9 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Phf11cB4XVP9 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Phf11cB4XVP9 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Phf11cB4XVP9 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Phf11cB4XVP9 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Phf11cB4XVP9 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Phf11cB4XVP9 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Phf11cB4XVP9 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Phf11cB4XVP9 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Phf11cB4XVP9 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Phf11cB4XVP9 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Phf11cB4XVP9 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Phf11cB4XVP9 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Phf11cB4XVP9 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Phf11cB4XVP9 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Phf11cB4XVP9 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Phf11cB4XVP9 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.55□□□□□ -0.4
Phf11cB4XVP9 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.55□□□□□ -0.4
Phf11cB4XVP9 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Phf11cB4XVP9 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Phf11cB4XVP9 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Phf11cB4XVP9 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.55□□□□□ -0.4
Phf11cB4XVP9 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Phf11cB4XVP9 Gm7775-201ENSMUST00000218871 853 ntBASIC12.55□□□□□ -0.4
Phf11cB4XVP9 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.55□□□□□ -0.4
Phf11cB4XVP9 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Phf11cB4XVP9 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Phf11cB4XVP9 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Phf11cB4XVP9 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Phf11cB4XVP9 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Phf11cB4XVP9 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Phf11cB4XVP9 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Phf11cB4XVP9 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Phf11cB4XVP9 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Phf11cB4XVP9 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Phf11cB4XVP9 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.55□□□□□ -0.4
Phf11cB4XVP9 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Phf11cB4XVP9 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Phf11cB4XVP9 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Phf11cB4XVP9 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Phf11cB4XVP9 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Phf11cB4XVP9 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Phf11cB4XVP9 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Phf11cB4XVP9 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Phf11cB4XVP9 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Phf11cB4XVP9 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Phf11cB4XVP9 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Phf11cB4XVP9 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms