Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim39Q9ESN2 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim39Q9ESN2 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim39Q9ESN2 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.46□□□□□ -0.41
Trim39Q9ESN2 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim39Q9ESN2 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trim39Q9ESN2 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.46□□□□□ -0.41
Trim39Q9ESN2 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim39Q9ESN2 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.46□□□□□ -0.41
Trim39Q9ESN2 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim39Q9ESN2 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim39Q9ESN2 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.46□□□□□ -0.41
Trim39Q9ESN2 Gm15920-201ENSMUST00000118998 402 ntBASIC12.46□□□□□ -0.41
Trim39Q9ESN2 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim39Q9ESN2 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim39Q9ESN2 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim39Q9ESN2 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.46□□□□□ -0.41
Trim39Q9ESN2 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim39Q9ESN2 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim39Q9ESN2 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim39Q9ESN2 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim39Q9ESN2 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.46□□□□□ -0.41
Trim39Q9ESN2 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim39Q9ESN2 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trim39Q9ESN2 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trim39Q9ESN2 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim39Q9ESN2 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.46□□□□□ -0.41
Trim39Q9ESN2 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trim39Q9ESN2 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.46□□□□□ -0.42
Trim39Q9ESN2 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Trim39Q9ESN2 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim39Q9ESN2 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim39Q9ESN2 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Trim39Q9ESN2 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim39Q9ESN2 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Gm4875-201ENSMUST00000118257 786 ntBASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Mir497b-201ENSMUST00000093601 125 ntBASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trim39Q9ESN2 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms