Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.47□□□□□ -0.09
Ssr1Q9CY50 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssr1Q9CY50 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.47□□□□□ -0.09
Ssr1Q9CY50 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ssr1Q9CY50 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssr1Q9CY50 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ssr1Q9CY50 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.47□□□□□ -0.09
Ssr1Q9CY50 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ssr1Q9CY50 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.47□□□□□ -0.09
Ssr1Q9CY50 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssr1Q9CY50 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ssr1Q9CY50 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssr1Q9CY50 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssr1Q9CY50 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssr1Q9CY50 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Ssr1Q9CY50 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssr1Q9CY50 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Ssr1Q9CY50 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssr1Q9CY50 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ssr1Q9CY50 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssr1Q9CY50 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssr1Q9CY50 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssr1Q9CY50 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssr1Q9CY50 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssr1Q9CY50 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC14.47□□□□□ -0.09
Ssr1Q9CY50 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssr1Q9CY50 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssr1Q9CY50 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssr1Q9CY50 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssr1Q9CY50 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Ssr1Q9CY50 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ssr1Q9CY50 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ssr1Q9CY50 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ssr1Q9CY50 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ssr1Q9CY50 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ssr1Q9CY50 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ssr1Q9CY50 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ssr1Q9CY50 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ssr1Q9CY50 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ssr1Q9CY50 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ssr1Q9CY50 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ssr1Q9CY50 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Ssr1Q9CY50 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ssr1Q9CY50 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.46□□□□□ -0.09
Ssr1Q9CY50 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Ssr1Q9CY50 Gm4804-201ENSMUST00000182234 999 ntBASIC14.46□□□□□ -0.09
Ssr1Q9CY50 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Ssr1Q9CY50 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.46□□□□□ -0.09
Ssr1Q9CY50 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.46□□□□□ -0.09
Ssr1Q9CY50 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ssr1Q9CY50 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ssr1Q9CY50 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ssr1Q9CY50 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.46□□□□□ -0.09
Ssr1Q9CY50 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ssr1Q9CY50 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ssr1Q9CY50 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.46□□□□□ -0.09
Ssr1Q9CY50 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ssr1Q9CY50 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ssr1Q9CY50 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ssr1Q9CY50 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ssr1Q9CY50 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ssr1Q9CY50 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ssr1Q9CY50 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.46□□□□□ -0.1
Ssr1Q9CY50 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.1
Ssr1Q9CY50 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssr1Q9CY50 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC14.45□□□□□ -0.1
Ssr1Q9CY50 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Ssr1Q9CY50 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssr1Q9CY50 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssr1Q9CY50 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssr1Q9CY50 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssr1Q9CY50 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ssr1Q9CY50 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssr1Q9CY50 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssr1Q9CY50 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssr1Q9CY50 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ssr1Q9CY50 Gm14767-201ENSMUST00000121559 586 ntBASIC14.45□□□□□ -0.1
Ssr1Q9CY50 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.45□□□□□ -0.1
Ssr1Q9CY50 Gm3436-201ENSMUST00000179930 840 ntBASIC14.45□□□□□ -0.1
Ssr1Q9CY50 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.45□□□□□ -0.1
Ssr1Q9CY50 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssr1Q9CY50 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Ssr1Q9CY50 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.45□□□□□ -0.1
Ssr1Q9CY50 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssr1Q9CY50 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssr1Q9CY50 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssr1Q9CY50 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ssr1Q9CY50 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Ssr1Q9CY50 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Ssr1Q9CY50 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Ssr1Q9CY50 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssr1Q9CY50 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.45□□□□□ -0.1
Ssr1Q9CY50 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssr1Q9CY50 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssr1Q9CY50 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Ssr1Q9CY50 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.45□□□□□ -0.1
Ssr1Q9CY50 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssr1Q9CY50 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssr1Q9CY50 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Ssr1Q9CY50 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 128.3 ms