Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RTRAFQ9CQE8 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RTRAFQ9CQE8 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RTRAFQ9CQE8 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.78□□□□□ -0.68
RTRAFQ9CQE8 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.78□□□□□ -0.68
RTRAFQ9CQE8 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RTRAFQ9CQE8 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RTRAFQ9CQE8 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
RTRAFQ9CQE8 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
RTRAFQ9CQE8 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
RTRAFQ9CQE8 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
RTRAFQ9CQE8 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
RTRAFQ9CQE8 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RTRAFQ9CQE8 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
RTRAFQ9CQE8 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RTRAFQ9CQE8 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RTRAFQ9CQE8 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC10.77□□□□□ -0.69
RTRAFQ9CQE8 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
RTRAFQ9CQE8 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
RTRAFQ9CQE8 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
RTRAFQ9CQE8 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RTRAFQ9CQE8 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RTRAFQ9CQE8 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RTRAFQ9CQE8 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC10.77□□□□□ -0.69
RTRAFQ9CQE8 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RTRAFQ9CQE8 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RTRAFQ9CQE8 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RTRAFQ9CQE8 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RTRAFQ9CQE8 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
RTRAFQ9CQE8 Gm15459-201ENSMUST00000117405 1941 ntBASIC10.77□□□□□ -0.69
RTRAFQ9CQE8 Gm8355-201ENSMUST00000177767 1941 ntBASIC10.77□□□□□ -0.69
RTRAFQ9CQE8 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
RTRAFQ9CQE8 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RTRAFQ9CQE8 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RTRAFQ9CQE8 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
RTRAFQ9CQE8 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RTRAFQ9CQE8 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
RTRAFQ9CQE8 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RTRAFQ9CQE8 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
RTRAFQ9CQE8 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
RTRAFQ9CQE8 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RTRAFQ9CQE8 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RTRAFQ9CQE8 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RTRAFQ9CQE8 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RTRAFQ9CQE8 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 AC164426.2-201ENSMUST00000225993 2492 ntBASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Gm13597-201ENSMUST00000121239 375 ntBASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Gm18027-201ENSMUST00000218947 619 ntBASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
RTRAFQ9CQE8 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC10.75□□□□□ -0.69
RTRAFQ9CQE8 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RTRAFQ9CQE8 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.75□□□□□ -0.69
RTRAFQ9CQE8 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RTRAFQ9CQE8 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RTRAFQ9CQE8 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
RTRAFQ9CQE8 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RTRAFQ9CQE8 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
RTRAFQ9CQE8 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RTRAFQ9CQE8 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RTRAFQ9CQE8 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
RTRAFQ9CQE8 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms