Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clp1Q99LI9 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clp1Q99LI9 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.95□□□□□ -0.18
Clp1Q99LI9 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Clp1Q99LI9 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.95□□□□□ -0.18
Clp1Q99LI9 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Clp1Q99LI9 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clp1Q99LI9 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clp1Q99LI9 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clp1Q99LI9 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clp1Q99LI9 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Clp1Q99LI9 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.94□□□□□ -0.18
Clp1Q99LI9 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clp1Q99LI9 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.94□□□□□ -0.18
Clp1Q99LI9 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clp1Q99LI9 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Clp1Q99LI9 Gm11930-201ENSMUST00000117788 190 ntBASIC13.94□□□□□ -0.18
Clp1Q99LI9 Gm14130-201ENSMUST00000118417 987 ntBASIC13.94□□□□□ -0.18
Clp1Q99LI9 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Clp1Q99LI9 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC13.94□□□□□ -0.18
Clp1Q99LI9 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Clp1Q99LI9 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clp1Q99LI9 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.94□□□□□ -0.18
Clp1Q99LI9 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.94□□□□□ -0.18
Clp1Q99LI9 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clp1Q99LI9 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clp1Q99LI9 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clp1Q99LI9 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Clp1Q99LI9 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clp1Q99LI9 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clp1Q99LI9 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clp1Q99LI9 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Clp1Q99LI9 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.94□□□□□ -0.18
Clp1Q99LI9 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC13.94□□□□□ -0.18
Clp1Q99LI9 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clp1Q99LI9 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.94□□□□□ -0.18
Clp1Q99LI9 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Clp1Q99LI9 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clp1Q99LI9 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Clp1Q99LI9 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clp1Q99LI9 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Clp1Q99LI9 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clp1Q99LI9 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clp1Q99LI9 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clp1Q99LI9 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clp1Q99LI9 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Clp1Q99LI9 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Clp1Q99LI9 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clp1Q99LI9 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Clp1Q99LI9 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Clp1Q99LI9 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Clp1Q99LI9 Gm14716-201ENSMUST00000120138 718 ntBASIC13.93□□□□□ -0.18
Clp1Q99LI9 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.93□□□□□ -0.18
Clp1Q99LI9 B9d1os-201ENSMUST00000137010 674 ntBASIC13.93□□□□□ -0.18
Clp1Q99LI9 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clp1Q99LI9 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Clp1Q99LI9 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Clp1Q99LI9 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.93□□□□□ -0.18
Clp1Q99LI9 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.93□□□□□ -0.18
Clp1Q99LI9 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Clp1Q99LI9 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Clp1Q99LI9 Gm2546-201ENSMUST00000182630 991 ntBASIC13.93□□□□□ -0.18
Clp1Q99LI9 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.93□□□□□ -0.18
Clp1Q99LI9 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Clp1Q99LI9 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Clp1Q99LI9 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.93□□□□□ -0.18
Clp1Q99LI9 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.93□□□□□ -0.18
Clp1Q99LI9 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.93□□□□□ -0.18
Clp1Q99LI9 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Clp1Q99LI9 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.93□□□□□ -0.18
Clp1Q99LI9 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Clp1Q99LI9 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.93□□□□□ -0.18
Clp1Q99LI9 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clp1Q99LI9 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.93□□□□□ -0.18
Clp1Q99LI9 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clp1Q99LI9 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Clp1Q99LI9 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clp1Q99LI9 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clp1Q99LI9 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Clp1Q99LI9 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clp1Q99LI9 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Clp1Q99LI9 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.93□□□□□ -0.18
Clp1Q99LI9 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.93□□□□□ -0.18
Clp1Q99LI9 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clp1Q99LI9 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.92□□□□□ -0.18
Clp1Q99LI9 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clp1Q99LI9 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clp1Q99LI9 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Clp1Q99LI9 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.92□□□□□ -0.18
Clp1Q99LI9 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clp1Q99LI9 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
Clp1Q99LI9 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Clp1Q99LI9 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.92□□□□□ -0.18
Clp1Q99LI9 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clp1Q99LI9 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clp1Q99LI9 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clp1Q99LI9 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clp1Q99LI9 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Clp1Q99LI9 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clp1Q99LI9 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms