Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Lysmd3Q99LE3 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lysmd3Q99LE3 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lysmd3Q99LE3 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Lysmd3Q99LE3 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lysmd3Q99LE3 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 Gm14660-201ENSMUST00000119809 575 ntBASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 AY702102-202ENSMUST00000194651 1173 ntBASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lysmd3Q99LE3 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Lysmd3Q99LE3 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Lysmd3Q99LE3 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Lysmd3Q99LE3 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Lysmd3Q99LE3 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Lysmd3Q99LE3 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Lysmd3Q99LE3 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Lysmd3Q99LE3 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Lysmd3Q99LE3 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Lysmd3Q99LE3 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lysmd3Q99LE3 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.77□□□□□ -0.21
Lysmd3Q99LE3 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lysmd3Q99LE3 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Lysmd3Q99LE3 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lysmd3Q99LE3 Gm11618-201ENSMUST00000117946 267 ntBASIC13.77□□□□□ -0.21
Lysmd3Q99LE3 Gm13369-201ENSMUST00000119442 987 ntBASIC13.77□□□□□ -0.21
Lysmd3Q99LE3 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.77□□□□□ -0.21
Lysmd3Q99LE3 Gm16177-201ENSMUST00000120728 718 ntBASIC13.77□□□□□ -0.21
Lysmd3Q99LE3 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.77□□□□□ -0.21
Lysmd3Q99LE3 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lysmd3Q99LE3 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lysmd3Q99LE3 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lysmd3Q99LE3 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lysmd3Q99LE3 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lysmd3Q99LE3 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lysmd3Q99LE3 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lysmd3Q99LE3 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lysmd3Q99LE3 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.77□□□□□ -0.21
Lysmd3Q99LE3 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lysmd3Q99LE3 Gm40466-201ENSMUST00000212174 422 ntBASIC13.77□□□□□ -0.21
Lysmd3Q99LE3 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lysmd3Q99LE3 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lysmd3Q99LE3 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lysmd3Q99LE3 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Lysmd3Q99LE3 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Lysmd3Q99LE3 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Lysmd3Q99LE3 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lysmd3Q99LE3 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lysmd3Q99LE3 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lysmd3Q99LE3 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lysmd3Q99LE3 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lysmd3Q99LE3 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lysmd3Q99LE3 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Lysmd3Q99LE3 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lysmd3Q99LE3 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lysmd3Q99LE3 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Lysmd3Q99LE3 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Lysmd3Q99LE3 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.76□□□□□ -0.21
Lysmd3Q99LE3 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.76□□□□□ -0.21
Lysmd3Q99LE3 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.76□□□□□ -0.21
Lysmd3Q99LE3 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Lysmd3Q99LE3 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms