Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm11618-201ENSMUST00000117946 267 ntBASIC14.72□□□□□ -0.05
Trim47Q8C0E3 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim47Q8C0E3 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.72□□□□□ -0.05
Trim47Q8C0E3 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim47Q8C0E3 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim47Q8C0E3 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim47Q8C0E3 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.72□□□□□ -0.05
Trim47Q8C0E3 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trim47Q8C0E3 Gm45784-201ENSMUST00000188360 142 ntBASIC14.72□□□□□ -0.05
Trim47Q8C0E3 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.72□□□□□ -0.05
Trim47Q8C0E3 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.72□□□□□ -0.05
Trim47Q8C0E3 Gm45841-201ENSMUST00000207700 164 ntBASIC14.72□□□□□ -0.05
Trim47Q8C0E3 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.72□□□□□ -0.05
Trim47Q8C0E3 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim47Q8C0E3 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim47Q8C0E3 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim47Q8C0E3 Gm16372-201ENSMUST00000073088 450 ntBASIC14.72□□□□□ -0.05
Trim47Q8C0E3 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trim47Q8C0E3 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim47Q8C0E3 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim47Q8C0E3 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim47Q8C0E3 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim47Q8C0E3 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim47Q8C0E3 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.72□□□□□ -0.05
Trim47Q8C0E3 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim47Q8C0E3 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trim47Q8C0E3 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim47Q8C0E3 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trim47Q8C0E3 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim47Q8C0E3 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim47Q8C0E3 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim47Q8C0E3 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim47Q8C0E3 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Trim47Q8C0E3 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.71□□□□□ -0.05
Trim47Q8C0E3 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim47Q8C0E3 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim47Q8C0E3 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim47Q8C0E3 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim47Q8C0E3 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim47Q8C0E3 Gm13123-201ENSMUST00000122173 492 ntBASIC14.71□□□□□ -0.05
Trim47Q8C0E3 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim47Q8C0E3 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim47Q8C0E3 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim47Q8C0E3 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim47Q8C0E3 Gm37922-201ENSMUST00000195596 455 ntBASIC14.71□□□□□ -0.05
Trim47Q8C0E3 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trim47Q8C0E3 Gm43818-201ENSMUST00000200605 466 ntBASIC14.71□□□□□ -0.05
Trim47Q8C0E3 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.71□□□□□ -0.05
Trim47Q8C0E3 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.71□□□□□ -0.05
Trim47Q8C0E3 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim47Q8C0E3 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim47Q8C0E3 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim47Q8C0E3 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim47Q8C0E3 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim47Q8C0E3 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Trim47Q8C0E3 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim47Q8C0E3 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim47Q8C0E3 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim47Q8C0E3 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim47Q8C0E3 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim47Q8C0E3 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim47Q8C0E3 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim47Q8C0E3 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim47Q8C0E3 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim47Q8C0E3 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim47Q8C0E3 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trim47Q8C0E3 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim47Q8C0E3 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim47Q8C0E3 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim47Q8C0E3 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim47Q8C0E3 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Trim47Q8C0E3 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim47Q8C0E3 Gm16202-201ENSMUST00000117532 544 ntBASIC14.7□□□□□ -0.06
Trim47Q8C0E3 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.7□□□□□ -0.06
Trim47Q8C0E3 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.7□□□□□ -0.06
Trim47Q8C0E3 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.7□□□□□ -0.06
Trim47Q8C0E3 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim47Q8C0E3 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trim47Q8C0E3 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.7□□□□□ -0.06
Trim47Q8C0E3 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.7□□□□□ -0.06
Trim47Q8C0E3 Gm4271-201ENSMUST00000174444 973 ntBASIC14.7□□□□□ -0.06
Trim47Q8C0E3 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trim47Q8C0E3 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trim47Q8C0E3 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim47Q8C0E3 AY702102-202ENSMUST00000194651 1173 ntBASIC14.7□□□□□ -0.06
Trim47Q8C0E3 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.7□□□□□ -0.06
Trim47Q8C0E3 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.7□□□□□ -0.06
Trim47Q8C0E3 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.7□□□□□ -0.06
Trim47Q8C0E3 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.7□□□□□ -0.06
Trim47Q8C0E3 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trim47Q8C0E3 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim47Q8C0E3 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim47Q8C0E3 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim47Q8C0E3 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim47Q8C0E3 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim47Q8C0E3 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim47Q8C0E3 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.7□□□□□ -0.06
Trim47Q8C0E3 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trim47Q8C0E3 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trim47Q8C0E3 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms