Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.7□□□□□ -0.22
Trub1Q8C0D0 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trub1Q8C0D0 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.7□□□□□ -0.22
Trub1Q8C0D0 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trub1Q8C0D0 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trub1Q8C0D0 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Trub1Q8C0D0 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.7□□□□□ -0.22
Trub1Q8C0D0 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trub1Q8C0D0 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trub1Q8C0D0 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trub1Q8C0D0 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
Trub1Q8C0D0 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trub1Q8C0D0 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.7□□□□□ -0.22
Trub1Q8C0D0 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trub1Q8C0D0 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trub1Q8C0D0 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Trub1Q8C0D0 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trub1Q8C0D0 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trub1Q8C0D0 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trub1Q8C0D0 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trub1Q8C0D0 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trub1Q8C0D0 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trub1Q8C0D0 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trub1Q8C0D0 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trub1Q8C0D0 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trub1Q8C0D0 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trub1Q8C0D0 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trub1Q8C0D0 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trub1Q8C0D0 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trub1Q8C0D0 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.69□□□□□ -0.22
Trub1Q8C0D0 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.69□□□□□ -0.22
Trub1Q8C0D0 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.69□□□□□ -0.22
Trub1Q8C0D0 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.69□□□□□ -0.22
Trub1Q8C0D0 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.69□□□□□ -0.22
Trub1Q8C0D0 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Trub1Q8C0D0 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trub1Q8C0D0 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trub1Q8C0D0 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trub1Q8C0D0 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trub1Q8C0D0 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trub1Q8C0D0 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.69□□□□□ -0.22
Trub1Q8C0D0 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trub1Q8C0D0 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trub1Q8C0D0 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trub1Q8C0D0 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trub1Q8C0D0 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Trub1Q8C0D0 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trub1Q8C0D0 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trub1Q8C0D0 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trub1Q8C0D0 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trub1Q8C0D0 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trub1Q8C0D0 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trub1Q8C0D0 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trub1Q8C0D0 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trub1Q8C0D0 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trub1Q8C0D0 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trub1Q8C0D0 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trub1Q8C0D0 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trub1Q8C0D0 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trub1Q8C0D0 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trub1Q8C0D0 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trub1Q8C0D0 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Trub1Q8C0D0 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trub1Q8C0D0 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trub1Q8C0D0 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trub1Q8C0D0 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trub1Q8C0D0 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trub1Q8C0D0 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trub1Q8C0D0 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trub1Q8C0D0 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trub1Q8C0D0 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trub1Q8C0D0 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.68□□□□□ -0.22
Trub1Q8C0D0 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.68□□□□□ -0.22
Trub1Q8C0D0 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trub1Q8C0D0 Gm5687-201ENSMUST00000118252 640 ntBASIC13.68□□□□□ -0.22
Trub1Q8C0D0 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trub1Q8C0D0 Gm19931-201ENSMUST00000198920 368 ntBASIC13.68□□□□□ -0.22
Trub1Q8C0D0 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trub1Q8C0D0 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.68□□□□□ -0.22
Trub1Q8C0D0 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.68□□□□□ -0.22
Trub1Q8C0D0 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Trub1Q8C0D0 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.68□□□□□ -0.22
Trub1Q8C0D0 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trub1Q8C0D0 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trub1Q8C0D0 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.68□□□□□ -0.22
Trub1Q8C0D0 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trub1Q8C0D0 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trub1Q8C0D0 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trub1Q8C0D0 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trub1Q8C0D0 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trub1Q8C0D0 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.68□□□□□ -0.22
Trub1Q8C0D0 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trub1Q8C0D0 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trub1Q8C0D0 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trub1Q8C0D0 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trub1Q8C0D0 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trub1Q8C0D0 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trub1Q8C0D0 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.67□□□□□ -0.22
Trub1Q8C0D0 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Trub1Q8C0D0 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms