Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC14.06□□□□□ -0.16
Rd3Q8BRE0 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rd3Q8BRE0 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC14.06□□□□□ -0.16
Rd3Q8BRE0 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC14.06□□□□□ -0.16
Rd3Q8BRE0 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.06□□□□□ -0.16
Rd3Q8BRE0 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.06□□□□□ -0.16
Rd3Q8BRE0 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.06□□□□□ -0.16
Rd3Q8BRE0 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Rd3Q8BRE0 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Rd3Q8BRE0 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rd3Q8BRE0 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rd3Q8BRE0 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rd3Q8BRE0 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rd3Q8BRE0 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rd3Q8BRE0 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.06□□□□□ -0.16
Rd3Q8BRE0 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rd3Q8BRE0 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rd3Q8BRE0 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rd3Q8BRE0 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rd3Q8BRE0 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rd3Q8BRE0 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rd3Q8BRE0 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rd3Q8BRE0 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rd3Q8BRE0 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Rd3Q8BRE0 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rd3Q8BRE0 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rd3Q8BRE0 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.05□□□□□ -0.16
Rd3Q8BRE0 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Rd3Q8BRE0 Gm15370-201ENSMUST00000117158 253 ntBASIC14.05□□□□□ -0.16
Rd3Q8BRE0 Gm6023-201ENSMUST00000118217 606 ntBASIC14.05□□□□□ -0.16
Rd3Q8BRE0 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.05□□□□□ -0.16
Rd3Q8BRE0 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC14.05□□□□□ -0.16
Rd3Q8BRE0 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Rd3Q8BRE0 Gm43758-201ENSMUST00000199500 367 ntBASIC14.05□□□□□ -0.16
Rd3Q8BRE0 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC14.05□□□□□ -0.16
Rd3Q8BRE0 Cts7-204ENSMUST00000225321 1257 ntBASIC14.05□□□□□ -0.16
Rd3Q8BRE0 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rd3Q8BRE0 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rd3Q8BRE0 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rd3Q8BRE0 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.05□□□□□ -0.16
Rd3Q8BRE0 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.05□□□□□ -0.16
Rd3Q8BRE0 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rd3Q8BRE0 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rd3Q8BRE0 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rd3Q8BRE0 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rd3Q8BRE0 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rd3Q8BRE0 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rd3Q8BRE0 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
Rd3Q8BRE0 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Acot6-202ENSMUST00000222921 3622 ntBASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Gm38341-201ENSMUST00000195357 515 ntBASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Gm45865-201ENSMUST00000211815 945 ntBASIC14.04□□□□□ -0.16
Rd3Q8BRE0 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rd3Q8BRE0 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rd3Q8BRE0 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms