Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC15.32■□□□□ 0.04
Prpf40bQ80W14 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf40bQ80W14 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf40bQ80W14 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC15.32■□□□□ 0.04
Prpf40bQ80W14 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf40bQ80W14 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC15.32■□□□□ 0.04
Prpf40bQ80W14 Gm29396-201ENSMUST00000185659 716 ntBASIC15.32■□□□□ 0.04
Prpf40bQ80W14 Gm42550-201ENSMUST00000201553 960 ntBASIC15.32■□□□□ 0.04
Prpf40bQ80W14 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf40bQ80W14 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf40bQ80W14 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf40bQ80W14 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf40bQ80W14 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf40bQ80W14 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf40bQ80W14 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf40bQ80W14 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf40bQ80W14 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf40bQ80W14 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf40bQ80W14 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf40bQ80W14 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf40bQ80W14 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf40bQ80W14 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf40bQ80W14 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf40bQ80W14 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf40bQ80W14 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf40bQ80W14 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Gm22323-201ENSMUST00000103832 109 ntBASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Gm5363-201ENSMUST00000211927 938 ntBASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Gm10608-202ENSMUST00000213924 676 ntBASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Gm10268-201ENSMUST00000085340 555 ntBASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Gm44207-201ENSMUST00000204568 1424 ntBASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Prpf40bQ80W14 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf40bQ80W14 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf40bQ80W14 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf40bQ80W14 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf40bQ80W14 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf40bQ80W14 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf40bQ80W14 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf40bQ80W14 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Prpf40bQ80W14 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf40bQ80W14 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf40bQ80W14 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC15.3■□□□□ 0.04
Prpf40bQ80W14 Gm17376-201ENSMUST00000166016 84 ntBASIC15.3■□□□□ 0.04
Prpf40bQ80W14 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf40bQ80W14 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Prpf40bQ80W14 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf40bQ80W14 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC15.3■□□□□ 0.04
Prpf40bQ80W14 Ighv1-51-201ENSMUST00000192903 354 ntBASIC15.3■□□□□ 0.04
Prpf40bQ80W14 Gm43289-201ENSMUST00000200537 1475 ntBASIC15.3■□□□□ 0.04
Prpf40bQ80W14 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Prpf40bQ80W14 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Prpf40bQ80W14 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf40bQ80W14 AC161252.3-201ENSMUST00000225465 1549 ntBASIC15.3■□□□□ 0.04
Prpf40bQ80W14 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf40bQ80W14 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf40bQ80W14 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf40bQ80W14 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Prpf40bQ80W14 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf40bQ80W14 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Prpf40bQ80W14 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf40bQ80W14 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Prpf40bQ80W14 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Prpf40bQ80W14 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf40bQ80W14 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf40bQ80W14 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf40bQ80W14 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms