Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.94□□□□□ -0.18
Prpf38bQ80SY5 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf38bQ80SY5 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf38bQ80SY5 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf38bQ80SY5 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf38bQ80SY5 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf38bQ80SY5 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf38bQ80SY5 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf38bQ80SY5 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf38bQ80SY5 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf38bQ80SY5 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Prpf38bQ80SY5 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf38bQ80SY5 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Prpf38bQ80SY5 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf38bQ80SY5 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf38bQ80SY5 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf38bQ80SY5 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf38bQ80SY5 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf38bQ80SY5 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf38bQ80SY5 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf38bQ80SY5 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.93□□□□□ -0.18
Prpf38bQ80SY5 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf38bQ80SY5 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf38bQ80SY5 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf38bQ80SY5 Gm12997-201ENSMUST00000120207 640 ntBASIC13.93□□□□□ -0.18
Prpf38bQ80SY5 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.93□□□□□ -0.18
Prpf38bQ80SY5 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.93□□□□□ -0.18
Prpf38bQ80SY5 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Prpf38bQ80SY5 Gm2383-201ENSMUST00000181461 807 ntBASIC13.93□□□□□ -0.18
Prpf38bQ80SY5 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.93□□□□□ -0.18
Prpf38bQ80SY5 Gm37008-201ENSMUST00000195712 319 ntBASIC13.93□□□□□ -0.18
Prpf38bQ80SY5 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Prpf38bQ80SY5 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf38bQ80SY5 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf38bQ80SY5 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf38bQ80SY5 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf38bQ80SY5 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf38bQ80SY5 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf38bQ80SY5 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf38bQ80SY5 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf38bQ80SY5 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf38bQ80SY5 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf38bQ80SY5 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.93□□□□□ -0.18
Prpf38bQ80SY5 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf38bQ80SY5 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 Gm22323-201ENSMUST00000103832 109 ntBASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 Gm14263-201ENSMUST00000117955 746 ntBASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 Gm14716-201ENSMUST00000120138 718 ntBASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 Gm11793-201ENSMUST00000120433 981 ntBASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 Gm44397-201ENSMUST00000195950 113 ntBASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Prpf38bQ80SY5 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf38bQ80SY5 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.91□□□□□ -0.18
Prpf38bQ80SY5 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Prpf38bQ80SY5 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Prpf38bQ80SY5 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf38bQ80SY5 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf38bQ80SY5 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf38bQ80SY5 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf38bQ80SY5 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Prpf38bQ80SY5 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf38bQ80SY5 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf38bQ80SY5 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf38bQ80SY5 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf38bQ80SY5 Gm22018-201ENSMUST00000104357 131 ntBASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms