Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hmgb4Q6P8W9 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hmgb4Q6P8W9 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hmgb4Q6P8W9 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hmgb4Q6P8W9 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Hmgb4Q6P8W9 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hmgb4Q6P8W9 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hmgb4Q6P8W9 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Hmgb4Q6P8W9 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb4Q6P8W9 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb4Q6P8W9 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb4Q6P8W9 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.92□□□□□ -0.18
Hmgb4Q6P8W9 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb4Q6P8W9 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb4Q6P8W9 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Hmgb4Q6P8W9 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb4Q6P8W9 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb4Q6P8W9 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb4Q6P8W9 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Hmgb4Q6P8W9 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Hmgb4Q6P8W9 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Hmgb4Q6P8W9 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Hmgb4Q6P8W9 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb4Q6P8W9 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb4Q6P8W9 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.92□□□□□ -0.18
Hmgb4Q6P8W9 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Hmgb4Q6P8W9 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.92□□□□□ -0.18
Hmgb4Q6P8W9 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.92□□□□□ -0.18
Hmgb4Q6P8W9 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.92□□□□□ -0.18
Hmgb4Q6P8W9 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Hmgb4Q6P8W9 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.92□□□□□ -0.18
Hmgb4Q6P8W9 Gm43818-201ENSMUST00000200605 466 ntBASIC13.92□□□□□ -0.18
Hmgb4Q6P8W9 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb4Q6P8W9 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb4Q6P8W9 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb4Q6P8W9 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Hmgb4Q6P8W9 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb4Q6P8W9 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Hmgb4Q6P8W9 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb4Q6P8W9 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Hmgb4Q6P8W9 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb4Q6P8W9 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb4Q6P8W9 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb4Q6P8W9 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb4Q6P8W9 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb4Q6P8W9 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.92□□□□□ -0.18
Hmgb4Q6P8W9 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Hmgb4Q6P8W9 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgb4Q6P8W9 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgb4Q6P8W9 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgb4Q6P8W9 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgb4Q6P8W9 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgb4Q6P8W9 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgb4Q6P8W9 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgb4Q6P8W9 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgb4Q6P8W9 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.91□□□□□ -0.18
Hmgb4Q6P8W9 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgb4Q6P8W9 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.91□□□□□ -0.18
Hmgb4Q6P8W9 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgb4Q6P8W9 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgb4Q6P8W9 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgb4Q6P8W9 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Hmgb4Q6P8W9 Gm5370-201ENSMUST00000187187 574 ntBASIC13.91□□□□□ -0.18
Hmgb4Q6P8W9 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.91□□□□□ -0.18
Hmgb4Q6P8W9 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgb4Q6P8W9 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.91□□□□□ -0.18
Hmgb4Q6P8W9 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Hmgb4Q6P8W9 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.91□□□□□ -0.18
Hmgb4Q6P8W9 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.91□□□□□ -0.18
Hmgb4Q6P8W9 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.91□□□□□ -0.18
Hmgb4Q6P8W9 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgb4Q6P8W9 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.91□□□□□ -0.18
Hmgb4Q6P8W9 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.91□□□□□ -0.18
Hmgb4Q6P8W9 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.91□□□□□ -0.18
Hmgb4Q6P8W9 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.91□□□□□ -0.18
Hmgb4Q6P8W9 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgb4Q6P8W9 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Hmgb4Q6P8W9 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.91□□□□□ -0.18
Hmgb4Q6P8W9 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgb4Q6P8W9 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.91□□□□□ -0.18
Hmgb4Q6P8W9 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.91□□□□□ -0.18
Hmgb4Q6P8W9 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgb4Q6P8W9 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgb4Q6P8W9 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Hmgb4Q6P8W9 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.9□□□□□ -0.18
Hmgb4Q6P8W9 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.9□□□□□ -0.18
Hmgb4Q6P8W9 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb4Q6P8W9 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb4Q6P8W9 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb4Q6P8W9 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.9□□□□□ -0.18
Hmgb4Q6P8W9 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb4Q6P8W9 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb4Q6P8W9 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb4Q6P8W9 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb4Q6P8W9 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb4Q6P8W9 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb4Q6P8W9 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb4Q6P8W9 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Hmgb4Q6P8W9 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb4Q6P8W9 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms