Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim27Q62158 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC16.29■□□□□ 0.2
Trim27Q62158 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.29■□□□□ 0.2
Trim27Q62158 AC154276.1-201ENSMUST00000228874 1299 ntBASIC16.29■□□□□ 0.2
Trim27Q62158 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim27Q62158 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim27Q62158 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim27Q62158 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim27Q62158 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim27Q62158 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim27Q62158 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trim27Q62158 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim27Q62158 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
Trim27Q62158 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim27Q62158 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trim27Q62158 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
Trim27Q62158 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim27Q62158 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim27Q62158 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim27Q62158 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim27Q62158 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trim27Q62158 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trim27Q62158 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim27Q62158 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim27Q62158 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim27Q62158 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim27Q62158 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC16.28■□□□□ 0.2
Trim27Q62158 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim27Q62158 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.28■□□□□ 0.2
Trim27Q62158 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC16.28■□□□□ 0.2
Trim27Q62158 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim27Q62158 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim27Q62158 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim27Q62158 Gm44069-201ENSMUST00000204898 506 ntBASIC16.28■□□□□ 0.2
Trim27Q62158 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim27Q62158 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim27Q62158 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim27Q62158 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trim27Q62158 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim27Q62158 Gm9025-201ENSMUST00000122415 1575 ntBASIC16.28■□□□□ 0.2
Trim27Q62158 AC113060.1-201ENSMUST00000225689 1573 ntBASIC16.28■□□□□ 0.2
Trim27Q62158 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim27Q62158 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trim27Q62158 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC16.28■□□□□ 0.2
Trim27Q62158 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim27Q62158 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim27Q62158 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Trim27Q62158 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim27Q62158 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim27Q62158 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim27Q62158 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim27Q62158 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trim27Q62158 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC16.27■□□□□ 0.2
Trim27Q62158 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim27Q62158 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Trim27Q62158 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim27Q62158 Gm13612-201ENSMUST00000119276 390 ntBASIC16.27■□□□□ 0.2
Trim27Q62158 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC16.27■□□□□ 0.2
Trim27Q62158 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim27Q62158 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim27Q62158 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim27Q62158 Gm15544-201ENSMUST00000118776 1531 ntBASIC16.27■□□□□ 0.2
Trim27Q62158 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim27Q62158 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim27Q62158 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Trim27Q62158 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim27Q62158 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim27Q62158 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Trim27Q62158 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC16.27■□□□□ 0.19
Trim27Q62158 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trim27Q62158 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim27Q62158 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim27Q62158 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trim27Q62158 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
Trim27Q62158 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC16.27■□□□□ 0.19
Trim27Q62158 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim27Q62158 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Trim27Q62158 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim27Q62158 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim27Q62158 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim27Q62158 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim27Q62158 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim27Q62158 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim27Q62158 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trim27Q62158 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim27Q62158 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trim27Q62158 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim27Q62158 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.26■□□□□ 0.19
Trim27Q62158 Gm7287-201ENSMUST00000205267 602 ntBASIC16.26■□□□□ 0.19
Trim27Q62158 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.26■□□□□ 0.19
Trim27Q62158 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim27Q62158 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC16.26■□□□□ 0.19
Trim27Q62158 AC173210.1-201ENSMUST00000222341 1131 ntBASIC16.26■□□□□ 0.19
Trim27Q62158 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim27Q62158 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim27Q62158 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim27Q62158 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trim27Q62158 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim27Q62158 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim27Q62158 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms