Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna5Q2MKA5 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna5Q2MKA5 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna5Q2MKA5 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna5Q2MKA5 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.68■□□□□ 0.1
Chrna5Q2MKA5 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna5Q2MKA5 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna5Q2MKA5 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna5Q2MKA5 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.68■□□□□ 0.1
Chrna5Q2MKA5 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna5Q2MKA5 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna5Q2MKA5 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna5Q2MKA5 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna5Q2MKA5 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna5Q2MKA5 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna5Q2MKA5 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC15.68■□□□□ 0.1
Chrna5Q2MKA5 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC15.68■□□□□ 0.1
Chrna5Q2MKA5 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC15.68■□□□□ 0.1
Chrna5Q2MKA5 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna5Q2MKA5 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Chrna5Q2MKA5 Gm25700-201ENSMUST00000177693 110 ntBASIC15.68■□□□□ 0.1
Chrna5Q2MKA5 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Chrna5Q2MKA5 Gm34767-201ENSMUST00000191813 1062 ntBASIC15.68■□□□□ 0.1
Chrna5Q2MKA5 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC15.68■□□□□ 0.1
Chrna5Q2MKA5 AC135669.1-202ENSMUST00000216742 540 ntBASIC15.68■□□□□ 0.1
Chrna5Q2MKA5 AC113031.8-201ENSMUST00000227856 631 ntBASIC15.68■□□□□ 0.1
Chrna5Q2MKA5 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Chrna5Q2MKA5 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna5Q2MKA5 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna5Q2MKA5 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna5Q2MKA5 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna5Q2MKA5 Gm37737-201ENSMUST00000195013 1638 ntBASIC15.68■□□□□ 0.1
Chrna5Q2MKA5 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna5Q2MKA5 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna5Q2MKA5 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Chrna5Q2MKA5 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna5Q2MKA5 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna5Q2MKA5 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna5Q2MKA5 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna5Q2MKA5 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna5Q2MKA5 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Chrna5Q2MKA5 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna5Q2MKA5 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna5Q2MKA5 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna5Q2MKA5 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna5Q2MKA5 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna5Q2MKA5 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna5Q2MKA5 Gm23200-201ENSMUST00000104379 132 ntBASIC15.67■□□□□ 0.1
Chrna5Q2MKA5 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna5Q2MKA5 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna5Q2MKA5 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna5Q2MKA5 Gm15547-201ENSMUST00000122152 333 ntBASIC15.67■□□□□ 0.1
Chrna5Q2MKA5 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna5Q2MKA5 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC15.67■□□□□ 0.1
Chrna5Q2MKA5 Gm27046-201ENSMUST00000182160 463 ntBASIC15.67■□□□□ 0.1
Chrna5Q2MKA5 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC15.67■□□□□ 0.1
Chrna5Q2MKA5 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna5Q2MKA5 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna5Q2MKA5 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna5Q2MKA5 Gm22058-201ENSMUST00000083393 310 ntBASIC15.67■□□□□ 0.1
Chrna5Q2MKA5 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Chrna5Q2MKA5 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna5Q2MKA5 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna5Q2MKA5 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna5Q2MKA5 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna5Q2MKA5 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Chrna5Q2MKA5 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna5Q2MKA5 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Chrna5Q2MKA5 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC15.67■□□□□ 0.1
Chrna5Q2MKA5 Gm5846-201ENSMUST00000193146 1414 ntBASIC15.67■□□□□ 0.1
Chrna5Q2MKA5 CU062626.3-201ENSMUST00000225522 1411 ntBASIC15.67■□□□□ 0.1
Chrna5Q2MKA5 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna5Q2MKA5 Daam2-202ENSMUST00000224595 1926 ntBASIC15.66■□□□□ 0.1
Chrna5Q2MKA5 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna5Q2MKA5 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna5Q2MKA5 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna5Q2MKA5 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna5Q2MKA5 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna5Q2MKA5 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna5Q2MKA5 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna5Q2MKA5 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Chrna5Q2MKA5 Gm13665-201ENSMUST00000120830 528 ntBASIC15.66■□□□□ 0.1
Chrna5Q2MKA5 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna5Q2MKA5 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna5Q2MKA5 Gm27023-201ENSMUST00000182372 285 ntBASIC15.66■□□□□ 0.1
Chrna5Q2MKA5 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC15.66■□□□□ 0.1
Chrna5Q2MKA5 Gm38297-201ENSMUST00000195122 1057 ntBASIC15.66■□□□□ 0.1
Chrna5Q2MKA5 Gm45224-201ENSMUST00000208203 414 ntBASIC15.66■□□□□ 0.1
Chrna5Q2MKA5 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC15.66■□□□□ 0.1
Chrna5Q2MKA5 Gm5904-201ENSMUST00000210286 865 ntBASIC15.66■□□□□ 0.1
Chrna5Q2MKA5 Gm8712-201ENSMUST00000221090 701 ntBASIC15.66■□□□□ 0.1
Chrna5Q2MKA5 Gm29787-201ENSMUST00000222129 849 ntBASIC15.66■□□□□ 0.1
Chrna5Q2MKA5 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna5Q2MKA5 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna5Q2MKA5 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Chrna5Q2MKA5 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna5Q2MKA5 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Chrna5Q2MKA5 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna5Q2MKA5 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna5Q2MKA5 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms