Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smad1P70340 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smad1P70340 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smad1P70340 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.72□□□□□ -0.21
Smad1P70340 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smad1P70340 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smad1P70340 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smad1P70340 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smad1P70340 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smad1P70340 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smad1P70340 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smad1P70340 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Smad1P70340 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smad1P70340 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smad1P70340 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smad1P70340 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.71□□□□□ -0.21
Smad1P70340 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smad1P70340 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smad1P70340 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Smad1P70340 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smad1P70340 Gm11425-201ENSMUST00000119608 498 ntBASIC13.71□□□□□ -0.21
Smad1P70340 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.71□□□□□ -0.21
Smad1P70340 Gm13385-201ENSMUST00000121089 220 ntBASIC13.71□□□□□ -0.21
Smad1P70340 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smad1P70340 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smad1P70340 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smad1P70340 Gm9396-201ENSMUST00000076703 567 ntBASIC13.71□□□□□ -0.21
Smad1P70340 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smad1P70340 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
Smad1P70340 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smad1P70340 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smad1P70340 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Smad1P70340 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smad1P70340 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smad1P70340 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Smad1P70340 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smad1P70340 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smad1P70340 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smad1P70340 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smad1P70340 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smad1P70340 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smad1P70340 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smad1P70340 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smad1P70340 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
Smad1P70340 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smad1P70340 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.7□□□□□ -0.22
Smad1P70340 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smad1P70340 Mir698-201ENSMUST00000102164 109 ntBASIC13.7□□□□□ -0.22
Smad1P70340 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.7□□□□□ -0.22
Smad1P70340 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smad1P70340 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.7□□□□□ -0.22
Smad1P70340 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.7□□□□□ -0.22
Smad1P70340 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smad1P70340 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smad1P70340 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.7□□□□□ -0.22
Smad1P70340 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.7□□□□□ -0.22
Smad1P70340 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Smad1P70340 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.7□□□□□ -0.22
Smad1P70340 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.7□□□□□ -0.22
Smad1P70340 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Smad1P70340 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Smad1P70340 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smad1P70340 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smad1P70340 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smad1P70340 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smad1P70340 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smad1P70340 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smad1P70340 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.7□□□□□ -0.22
Smad1P70340 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smad1P70340 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smad1P70340 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smad1P70340 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smad1P70340 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
Smad1P70340 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Smad1P70340 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smad1P70340 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smad1P70340 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smad1P70340 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smad1P70340 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smad1P70340 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smad1P70340 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smad1P70340 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smad1P70340 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.69□□□□□ -0.22
Smad1P70340 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Smad1P70340 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Smad1P70340 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Smad1P70340 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Smad1P70340 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smad1P70340 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smad1P70340 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Smad1P70340 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.69□□□□□ -0.22
Smad1P70340 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Smad1P70340 Gm27701-201ENSMUST00000184498 110 ntBASIC13.69□□□□□ -0.22
Smad1P70340 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.69□□□□□ -0.22
Smad1P70340 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.69□□□□□ -0.22
Smad1P70340 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smad1P70340 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smad1P70340 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smad1P70340 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smad1P70340 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms