Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.54□□□□□ -0.4
Nup43P59235 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.54□□□□□ -0.4
Nup43P59235 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup43P59235 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup43P59235 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nup43P59235 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nup43P59235 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup43P59235 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Nup43P59235 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nup43P59235 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup43P59235 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup43P59235 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup43P59235 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Nup43P59235 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup43P59235 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup43P59235 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Nup43P59235 Mir1894-201ENSMUST00000122802 81 ntBASIC12.54□□□□□ -0.4
Nup43P59235 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Nup43P59235 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nup43P59235 Gm6244-201ENSMUST00000178732 841 ntBASIC12.54□□□□□ -0.4
Nup43P59235 Gm27892-201ENSMUST00000185017 106 ntBASIC12.54□□□□□ -0.4
Nup43P59235 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nup43P59235 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.54□□□□□ -0.4
Nup43P59235 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.54□□□□□ -0.4
Nup43P59235 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.54□□□□□ -0.4
Nup43P59235 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.54□□□□□ -0.4
Nup43P59235 Gm45841-201ENSMUST00000207700 164 ntBASIC12.54□□□□□ -0.4
Nup43P59235 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.54□□□□□ -0.4
Nup43P59235 Gm17794-201ENSMUST00000220252 955 ntBASIC12.54□□□□□ -0.4
Nup43P59235 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup43P59235 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Nup43P59235 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Nup43P59235 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup43P59235 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup43P59235 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Nup43P59235 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup43P59235 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup43P59235 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup43P59235 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nup43P59235 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup43P59235 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup43P59235 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup43P59235 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.54□□□□□ -0.4
Nup43P59235 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.54□□□□□ -0.4
Nup43P59235 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup43P59235 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Nup43P59235 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup43P59235 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup43P59235 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup43P59235 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup43P59235 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup43P59235 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup43P59235 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup43P59235 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nup43P59235 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.53□□□□□ -0.4
Nup43P59235 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup43P59235 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup43P59235 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup43P59235 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nup43P59235 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup43P59235 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup43P59235 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.53□□□□□ -0.4
Nup43P59235 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup43P59235 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.53□□□□□ -0.4
Nup43P59235 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Nup43P59235 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup43P59235 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup43P59235 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup43P59235 Gm13612-201ENSMUST00000119276 390 ntBASIC12.53□□□□□ -0.4
Nup43P59235 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Nup43P59235 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.53□□□□□ -0.4
Nup43P59235 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nup43P59235 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nup43P59235 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup43P59235 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup43P59235 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Nup43P59235 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup43P59235 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.53□□□□□ -0.4
Nup43P59235 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Nup43P59235 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup43P59235 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Nup43P59235 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.53□□□□□ -0.4
Nup43P59235 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.53□□□□□ -0.4
Nup43P59235 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.53□□□□□ -0.4
Nup43P59235 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nup43P59235 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup43P59235 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup43P59235 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nup43P59235 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nup43P59235 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nup43P59235 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nup43P59235 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Nup43P59235 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nup43P59235 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nup43P59235 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nup43P59235 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nup43P59235 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nup43P59235 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup43P59235 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup43P59235 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms