Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tpm1P58771 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tpm1P58771 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.8□□□□□ -0.04
Tpm1P58771 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tpm1P58771 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tpm1P58771 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tpm1P58771 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.8□□□□□ -0.04
Tpm1P58771 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tpm1P58771 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tpm1P58771 Gm24543-201ENSMUST00000103867 82 ntBASIC14.8□□□□□ -0.04
Tpm1P58771 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.8□□□□□ -0.04
Tpm1P58771 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tpm1P58771 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.8□□□□□ -0.04
Tpm1P58771 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.8□□□□□ -0.04
Tpm1P58771 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.8□□□□□ -0.04
Tpm1P58771 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.8□□□□□ -0.04
Tpm1P58771 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Tpm1P58771 Gm43125-201ENSMUST00000201724 730 ntBASIC14.8□□□□□ -0.04
Tpm1P58771 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.8□□□□□ -0.04
Tpm1P58771 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.8□□□□□ -0.04
Tpm1P58771 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tpm1P58771 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.8□□□□□ -0.04
Tpm1P58771 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Tpm1P58771 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tpm1P58771 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tpm1P58771 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tpm1P58771 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tpm1P58771 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tpm1P58771 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Tpm1P58771 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Tpm1P58771 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tpm1P58771 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tpm1P58771 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Tpm1P58771 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tpm1P58771 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tpm1P58771 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC14.79□□□□□ -0.04
Tpm1P58771 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tpm1P58771 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tpm1P58771 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.79□□□□□ -0.04
Tpm1P58771 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tpm1P58771 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tpm1P58771 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Tpm1P58771 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Tpm1P58771 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tpm1P58771 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tpm1P58771 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Tpm1P58771 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tpm1P58771 Gm15770-201ENSMUST00000117498 584 ntBASIC14.79□□□□□ -0.04
Tpm1P58771 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tpm1P58771 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.79□□□□□ -0.04
Tpm1P58771 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.79□□□□□ -0.04
Tpm1P58771 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tpm1P58771 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Tpm1P58771 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tpm1P58771 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Tpm1P58771 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.79□□□□□ -0.04
Tpm1P58771 Gm4804-201ENSMUST00000182234 999 ntBASIC14.79□□□□□ -0.04
Tpm1P58771 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.79□□□□□ -0.04
Tpm1P58771 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.79□□□□□ -0.04
Tpm1P58771 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tpm1P58771 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.79□□□□□ -0.04
Tpm1P58771 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tpm1P58771 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.79□□□□□ -0.04
Tpm1P58771 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.79□□□□□ -0.04
Tpm1P58771 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Tpm1P58771 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tpm1P58771 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tpm1P58771 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Tpm1P58771 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tpm1P58771 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Tpm1P58771 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tpm1P58771 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tpm1P58771 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Tpm1P58771 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tpm1P58771 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tpm1P58771 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Tpm1P58771 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tpm1P58771 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tpm1P58771 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tpm1P58771 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tpm1P58771 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tpm1P58771 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tpm1P58771 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tpm1P58771 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.78□□□□□ -0.04
Tpm1P58771 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.78□□□□□ -0.04
Tpm1P58771 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tpm1P58771 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tpm1P58771 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.78□□□□□ -0.04
Tpm1P58771 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tpm1P58771 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tpm1P58771 Gm11779-201ENSMUST00000118541 368 ntBASIC14.78□□□□□ -0.04
Tpm1P58771 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.78□□□□□ -0.04
Tpm1P58771 Gm13385-201ENSMUST00000121089 220 ntBASIC14.78□□□□□ -0.04
Tpm1P58771 Gm13365-201ENSMUST00000121188 973 ntBASIC14.78□□□□□ -0.04
Tpm1P58771 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.78□□□□□ -0.04
Tpm1P58771 Mir6990-201ENSMUST00000183724 91 ntBASIC14.78□□□□□ -0.04
Tpm1P58771 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.78□□□□□ -0.04
Tpm1P58771 Gm5425-201ENSMUST00000214125 459 ntBASIC14.78□□□□□ -0.04
Tpm1P58771 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Tpm1P58771 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms