Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NUBP1P53384 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NUBP1P53384 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.26■□□□□ 0.19
NUBP1P53384 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.26■□□□□ 0.19
NUBP1P53384 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.26■□□□□ 0.19
NUBP1P53384 MTATP6P31-201ENST00000406985 692 ntBASIC16.26■□□□□ 0.19
NUBP1P53384 MTND2P40-201ENST00000436718 841 ntBASIC16.26■□□□□ 0.19
NUBP1P53384 RN7SL769P-201ENST00000469386 295 ntBASIC16.26■□□□□ 0.19
NUBP1P53384 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NUBP1P53384 SAA2-203ENST00000526900 687 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
NUBP1P53384 MTCYBP27-201ENST00000555160 670 ntBASIC16.26■□□□□ 0.19
NUBP1P53384 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.26■□□□□ 0.19
NUBP1P53384 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.26■□□□□ 0.19
NUBP1P53384 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NUBP1P53384 BRI3BPP1-201ENST00000594224 787 ntBASIC16.26■□□□□ 0.19
NUBP1P53384 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.26■□□□□ 0.19
NUBP1P53384 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
NUBP1P53384 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NUBP1P53384 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
NUBP1P53384 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NUBP1P53384 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.26■□□□□ 0.19
NUBP1P53384 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.26■□□□□ 0.19
NUBP1P53384 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NUBP1P53384 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NUBP1P53384 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NUBP1P53384 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NUBP1P53384 AC130448.1-201ENST00000624179 1733 ntBASIC16.25■□□□□ 0.19
NUBP1P53384 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NUBP1P53384 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NUBP1P53384 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NUBP1P53384 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NUBP1P53384 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NUBP1P53384 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NUBP1P53384 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NUBP1P53384 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.25■□□□□ 0.19
NUBP1P53384 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NUBP1P53384 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
NUBP1P53384 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NUBP1P53384 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NUBP1P53384 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NUBP1P53384 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NUBP1P53384 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NUBP1P53384 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
NUBP1P53384 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
NUBP1P53384 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC16.25■□□□□ 0.19
NUBP1P53384 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.25■□□□□ 0.19
NUBP1P53384 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.25■□□□□ 0.19
NUBP1P53384 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.25■□□□□ 0.19
NUBP1P53384 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC16.25■□□□□ 0.19
NUBP1P53384 MAGEA5-201ENST00000446757 942 ntBASIC16.25■□□□□ 0.19
NUBP1P53384 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC16.25■□□□□ 0.19
NUBP1P53384 TPT1P8-201ENST00000510120 555 ntBASIC16.25■□□□□ 0.19
NUBP1P53384 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NUBP1P53384 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.25■□□□□ 0.19
NUBP1P53384 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC16.25■□□□□ 0.19
NUBP1P53384 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.25■□□□□ 0.19
NUBP1P53384 AC105129.2-201ENST00000559536 390 ntBASIC16.25■□□□□ 0.19
NUBP1P53384 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NUBP1P53384 RN7SL488P-201ENST00000585186 286 ntBASIC16.25■□□□□ 0.19
NUBP1P53384 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.25■□□□□ 0.19
NUBP1P53384 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NUBP1P53384 BNIP3P27-201ENST00000599991 412 ntBASIC16.25■□□□□ 0.19
NUBP1P53384 AC090373.1-201ENST00000623955 603 ntBASIC16.25■□□□□ 0.19
NUBP1P53384 CU459211.1-201ENST00000635667 749 ntBASIC16.25■□□□□ 0.19
NUBP1P53384 AC091948.2-201ENST00000636510 279 ntBASIC16.25■□□□□ 0.19
NUBP1P53384 AC009950.2-201ENST00000636548 183 ntBASIC16.25■□□□□ 0.19
NUBP1P53384 AC025287.4-201ENST00000640173 1240 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NUBP1P53384 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NUBP1P53384 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NUBP1P53384 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NUBP1P53384 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NUBP1P53384 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NUBP1P53384 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NUBP1P53384 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC16.24■□□□□ 0.19
NUBP1P53384 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUBP1P53384 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NUBP1P53384 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NUBP1P53384 AC007228.2-201ENST00000602145 1328 ntBASIC16.24■□□□□ 0.19
NUBP1P53384 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
NUBP1P53384 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUBP1P53384 KRT8P19-201ENST00000551916 1455 ntBASIC16.24■□□□□ 0.19
NUBP1P53384 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.24■□□□□ 0.19
NUBP1P53384 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
NUBP1P53384 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC16.24■□□□□ 0.19
NUBP1P53384 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NUBP1P53384 MTND4P13-201ENST00000402078 1023 ntBASIC16.24■□□□□ 0.19
NUBP1P53384 BAATP1-201ENST00000412284 1225 ntBASIC16.24■□□□□ 0.19
NUBP1P53384 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
NUBP1P53384 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC16.24■□□□□ 0.19
NUBP1P53384 AC117434.1-201ENST00000419971 836 ntBASIC16.24■□□□□ 0.19
NUBP1P53384 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC16.24■□□□□ 0.19
NUBP1P53384 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC16.24■□□□□ 0.19
NUBP1P53384 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NUBP1P53384 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NUBP1P53384 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC16.24■□□□□ 0.19
NUBP1P53384 RPS2P36-201ENST00000456516 831 ntBASIC16.24■□□□□ 0.19
NUBP1P53384 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC16.24■□□□□ 0.19
NUBP1P53384 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.24■□□□□ 0.19
NUBP1P53384 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.24■□□□□ 0.19
NUBP1P53384 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms