Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Gm24158-201ENSMUST00000175263 71 ntBASIC12.44□□□□□ -0.42
Sox2P48432 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Sox2P48432 Gm5779-201ENSMUST00000218467 910 ntBASIC12.44□□□□□ -0.42
Sox2P48432 Gm9229-201ENSMUST00000222777 126 ntBASIC12.44□□□□□ -0.42
Sox2P48432 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.44□□□□□ -0.42
Sox2P48432 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox2P48432 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox2P48432 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Sox2P48432 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox2P48432 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Sox2P48432 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Sox2P48432 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.44□□□□□ -0.42
Sox2P48432 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox2P48432 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox2P48432 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Sox2P48432 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Sox2P48432 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox2P48432 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox2P48432 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Sox2P48432 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox2P48432 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox2P48432 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox2P48432 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox2P48432 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox2P48432 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox2P48432 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox2P48432 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox2P48432 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.43□□□□□ -0.42
Sox2P48432 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox2P48432 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.43□□□□□ -0.42
Sox2P48432 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Sox2P48432 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.43□□□□□ -0.42
Sox2P48432 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Sox2P48432 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Sox2P48432 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox2P48432 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox2P48432 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.43□□□□□ -0.42
Sox2P48432 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox2P48432 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox2P48432 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.43□□□□□ -0.42
Sox2P48432 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.43□□□□□ -0.42
Sox2P48432 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox2P48432 Gm15653-201ENSMUST00000119247 907 ntBASIC12.43□□□□□ -0.42
Sox2P48432 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.43□□□□□ -0.42
Sox2P48432 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.43□□□□□ -0.42
Sox2P48432 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.43□□□□□ -0.42
Sox2P48432 Gm15393-201ENSMUST00000120499 219 ntBASIC12.43□□□□□ -0.42
Sox2P48432 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Sox2P48432 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.43□□□□□ -0.42
Sox2P48432 Gm24420-201ENSMUST00000176676 59 ntBASIC12.43□□□□□ -0.42
Sox2P48432 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox2P48432 Gm28630-201ENSMUST00000187806 498 ntBASIC12.43□□□□□ -0.42
Sox2P48432 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox2P48432 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.43□□□□□ -0.42
Sox2P48432 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.43□□□□□ -0.42
Sox2P48432 Gm46209-201ENSMUST00000217912 553 ntBASIC12.43□□□□□ -0.42
Sox2P48432 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox2P48432 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox2P48432 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox2P48432 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox2P48432 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox2P48432 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.43□□□□□ -0.42
Sox2P48432 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox2P48432 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox2P48432 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox2P48432 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox2P48432 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox2P48432 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox2P48432 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox2P48432 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox2P48432 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox2P48432 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox2P48432 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox2P48432 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox2P48432 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.43□□□□□ -0.42
Sox2P48432 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox2P48432 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox2P48432 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox2P48432 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.42□□□□□ -0.42
Sox2P48432 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox2P48432 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox2P48432 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox2P48432 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Sox2P48432 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox2P48432 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox2P48432 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox2P48432 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox2P48432 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Sox2P48432 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox2P48432 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.42□□□□□ -0.42
Sox2P48432 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox2P48432 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Sox2P48432 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox2P48432 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.42□□□□□ -0.42
Sox2P48432 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox2P48432 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.42□□□□□ -0.42
Sox2P48432 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox2P48432 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Sox2P48432 Gm8410-201ENSMUST00000117225 605 ntBASIC12.42□□□□□ -0.42
Sox2P48432 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms