Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col4a1P02463 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col4a1P02463 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Col4a1P02463 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Col4a1P02463 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Col4a1P02463 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col4a1P02463 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.99■□□□□ 0.15
Col4a1P02463 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col4a1P02463 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col4a1P02463 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col4a1P02463 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Col4a1P02463 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Col4a1P02463 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col4a1P02463 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Col4a1P02463 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col4a1P02463 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Col4a1P02463 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC15.99■□□□□ 0.15
Col4a1P02463 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col4a1P02463 Gm9555-201ENSMUST00000200908 583 ntBASIC15.99■□□□□ 0.15
Col4a1P02463 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col4a1P02463 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col4a1P02463 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col4a1P02463 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col4a1P02463 Gm8385-201ENSMUST00000058999 643 ntBASIC15.99■□□□□ 0.15
Col4a1P02463 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col4a1P02463 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Col4a1P02463 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col4a1P02463 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col4a1P02463 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col4a1P02463 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC15.99■□□□□ 0.15
Col4a1P02463 Gm11405-201ENSMUST00000118689 1556 ntBASIC15.99■□□□□ 0.15
Col4a1P02463 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Col4a1P02463 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC15.99■□□□□ 0.15
Col4a1P02463 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col4a1P02463 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col4a1P02463 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Col4a1P02463 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col4a1P02463 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Col4a1P02463 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Col4a1P02463 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Col4a1P02463 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Col4a1P02463 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Col4a1P02463 Gm12058-201ENSMUST00000118614 437 ntBASIC15.99■□□□□ 0.15
Col4a1P02463 Gm11597-201ENSMUST00000121423 964 ntBASIC15.99■□□□□ 0.15
Col4a1P02463 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC15.99■□□□□ 0.15
Col4a1P02463 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Col4a1P02463 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC15.99■□□□□ 0.15
Col4a1P02463 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col4a1P02463 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Col4a1P02463 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col4a1P02463 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col4a1P02463 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col4a1P02463 AC126444.1-201ENSMUST00000225938 1768 ntBASIC15.98■□□□□ 0.15
Col4a1P02463 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.98■□□□□ 0.15
Col4a1P02463 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col4a1P02463 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC15.98■□□□□ 0.15
Col4a1P02463 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col4a1P02463 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC15.98■□□□□ 0.15
Col4a1P02463 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col4a1P02463 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col4a1P02463 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.98■□□□□ 0.15
Col4a1P02463 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col4a1P02463 CU062626.3-201ENSMUST00000225522 1411 ntBASIC15.98■□□□□ 0.15
Col4a1P02463 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col4a1P02463 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC15.98■□□□□ 0.15
Col4a1P02463 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC15.98■□□□□ 0.15
Col4a1P02463 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
Col4a1P02463 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col4a1P02463 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC15.98■□□□□ 0.15
Col4a1P02463 Gm43947-201ENSMUST00000203019 959 ntBASIC15.98■□□□□ 0.15
Col4a1P02463 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Col4a1P02463 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col4a1P02463 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col4a1P02463 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col4a1P02463 Gm43908-201ENSMUST00000205074 1472 ntBASIC15.98■□□□□ 0.15
Col4a1P02463 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Col4a1P02463 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col4a1P02463 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col4a1P02463 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col4a1P02463 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col4a1P02463 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col4a1P02463 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col4a1P02463 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col4a1P02463 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col4a1P02463 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
Col4a1P02463 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col4a1P02463 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Col4a1P02463 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
Col4a1P02463 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col4a1P02463 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col4a1P02463 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col4a1P02463 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
Col4a1P02463 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col4a1P02463 Nsd1-205ENSMUST00000224693 852 ntBASIC15.97■□□□□ 0.15
Col4a1P02463 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col4a1P02463 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col4a1P02463 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col4a1P02463 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col4a1P02463 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col4a1P02463 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms