Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhb9E9Q5G2 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb9E9Q5G2 Gm38049-201ENSMUST00000195698 1372 ntBASIC15.6■□□□□ 0.09
Pcdhb9E9Q5G2 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.6■□□□□ 0.09
Pcdhb9E9Q5G2 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhb9E9Q5G2 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb9E9Q5G2 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb9E9Q5G2 Grk6-205ENSMUST00000224653 2976 ntBASIC15.6■□□□□ 0.09
Pcdhb9E9Q5G2 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb9E9Q5G2 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb9E9Q5G2 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb9E9Q5G2 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb9E9Q5G2 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb9E9Q5G2 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb9E9Q5G2 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb9E9Q5G2 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb9E9Q5G2 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb9E9Q5G2 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb9E9Q5G2 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb9E9Q5G2 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb9E9Q5G2 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb9E9Q5G2 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb9E9Q5G2 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb9E9Q5G2 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb9E9Q5G2 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC15.59■□□□□ 0.09
Pcdhb9E9Q5G2 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb9E9Q5G2 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC15.59■□□□□ 0.09
Pcdhb9E9Q5G2 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb9E9Q5G2 Gm2231-201ENSMUST00000125661 612 ntBASIC15.59■□□□□ 0.09
Pcdhb9E9Q5G2 Gm26927-201ENSMUST00000182385 965 ntBASIC15.59■□□□□ 0.09
Pcdhb9E9Q5G2 AC166349.1-201ENSMUST00000220866 695 ntBASIC15.59■□□□□ 0.09
Pcdhb9E9Q5G2 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb9E9Q5G2 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb9E9Q5G2 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC15.59■□□□□ 0.09
Pcdhb9E9Q5G2 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb9E9Q5G2 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb9E9Q5G2 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb9E9Q5G2 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb9E9Q5G2 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb9E9Q5G2 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb9E9Q5G2 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Pcdhb9E9Q5G2 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb9E9Q5G2 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb9E9Q5G2 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC15.59■□□□□ 0.09
Pcdhb9E9Q5G2 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb9E9Q5G2 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb9E9Q5G2 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC15.58■□□□□ 0.09
Pcdhb9E9Q5G2 Gm15459-201ENSMUST00000117405 1941 ntBASIC15.58■□□□□ 0.09
Pcdhb9E9Q5G2 Gm8355-201ENSMUST00000177767 1941 ntBASIC15.58■□□□□ 0.09
Pcdhb9E9Q5G2 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhb9E9Q5G2 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhb9E9Q5G2 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Pcdhb9E9Q5G2 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhb9E9Q5G2 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhb9E9Q5G2 Gm37795-201ENSMUST00000194216 2459 ntBASIC15.58■□□□□ 0.09
Pcdhb9E9Q5G2 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhb9E9Q5G2 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhb9E9Q5G2 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb9E9Q5G2 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb9E9Q5G2 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb9E9Q5G2 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb9E9Q5G2 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
Pcdhb9E9Q5G2 Gm16479-201ENSMUST00000121706 932 ntBASIC15.58■□□□□ 0.08
Pcdhb9E9Q5G2 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC15.58■□□□□ 0.08
Pcdhb9E9Q5G2 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb9E9Q5G2 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC15.58■□□□□ 0.08
Pcdhb9E9Q5G2 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC15.58■□□□□ 0.08
Pcdhb9E9Q5G2 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb9E9Q5G2 Tyms-ps-201ENSMUST00000219550 915 ntBASIC15.58■□□□□ 0.08
Pcdhb9E9Q5G2 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb9E9Q5G2 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb9E9Q5G2 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb9E9Q5G2 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb9E9Q5G2 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb9E9Q5G2 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb9E9Q5G2 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb9E9Q5G2 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC15.58■□□□□ 0.08
Pcdhb9E9Q5G2 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb9E9Q5G2 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb9E9Q5G2 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb9E9Q5G2 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb9E9Q5G2 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb9E9Q5G2 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Pcdhb9E9Q5G2 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb9E9Q5G2 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb9E9Q5G2 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhb9E9Q5G2 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb9E9Q5G2 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb9E9Q5G2 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb9E9Q5G2 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb9E9Q5G2 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb9E9Q5G2 Gm23931-201ENSMUST00000103842 109 ntBASIC15.57■□□□□ 0.08
Pcdhb9E9Q5G2 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhb9E9Q5G2 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb9E9Q5G2 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC15.57■□□□□ 0.08
Pcdhb9E9Q5G2 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb9E9Q5G2 Gm8565-201ENSMUST00000183259 1014 ntBASIC15.57■□□□□ 0.08
Pcdhb9E9Q5G2 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb9E9Q5G2 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC15.57■□□□□ 0.08
Pcdhb9E9Q5G2 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms