Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
CCDC144AA2RUR9 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC144AA2RUR9 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC23.16■■□□□ 1.3
CCDC144AA2RUR9 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
CCDC144AA2RUR9 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC23.16■■□□□ 1.3
CCDC144AA2RUR9 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC23.16■■□□□ 1.3
CCDC144AA2RUR9 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC23.16■■□□□ 1.3
CCDC144AA2RUR9 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
CCDC144AA2RUR9 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
CCDC144AA2RUR9 RARRES2P5-201ENST00000564013 466 ntBASIC23.16■■□□□ 1.3
CCDC144AA2RUR9 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC23.16■■□□□ 1.3
CCDC144AA2RUR9 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC23.16■■□□□ 1.3
CCDC144AA2RUR9 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
CCDC144AA2RUR9 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC23.16■■□□□ 1.3
CCDC144AA2RUR9 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC23.16■■□□□ 1.3
CCDC144AA2RUR9 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
CCDC144AA2RUR9 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC144AA2RUR9 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC144AA2RUR9 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC144AA2RUR9 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC23.16■■□□□ 1.3
CCDC144AA2RUR9 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
CCDC144AA2RUR9 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
CCDC144AA2RUR9 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
CCDC144AA2RUR9 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC144AA2RUR9 AC006449.6-201ENST00000612330 2296 ntBASIC23.16■■□□□ 1.3
CCDC144AA2RUR9 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC144AA2RUR9 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC144AA2RUR9 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC23.16■■□□□ 1.3
CCDC144AA2RUR9 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC23.16■■□□□ 1.3
CCDC144AA2RUR9 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC144AA2RUR9 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC144AA2RUR9 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC23.16■■□□□ 1.3
CCDC144AA2RUR9 TARDBPP1-201ENST00000442013 1203 ntBASIC23.16■■□□□ 1.3
CCDC144AA2RUR9 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC144AA2RUR9 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC23.16■■□□□ 1.3
CCDC144AA2RUR9 RN7SL752P-201ENST00000463779 287 ntBASIC23.16■■□□□ 1.3
CCDC144AA2RUR9 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC23.16■■□□□ 1.3
CCDC144AA2RUR9 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC23.16■■□□□ 1.3
CCDC144AA2RUR9 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC23.16■■□□□ 1.3
CCDC144AA2RUR9 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC144AA2RUR9 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC144AA2RUR9 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC144AA2RUR9 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC23.15■■□□□ 1.3
CCDC144AA2RUR9 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC144AA2RUR9 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC144AA2RUR9 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC144AA2RUR9 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC23.15■■□□□ 1.3
CCDC144AA2RUR9 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC144AA2RUR9 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC144AA2RUR9 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC144AA2RUR9 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC144AA2RUR9 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC144AA2RUR9 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC23.15■■□□□ 1.3
CCDC144AA2RUR9 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC23.15■■□□□ 1.3
CCDC144AA2RUR9 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC144AA2RUR9 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC144AA2RUR9 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC23.15■■□□□ 1.3
CCDC144AA2RUR9 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC144AA2RUR9 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC144AA2RUR9 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC144AA2RUR9 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC23.15■■□□□ 1.3
CCDC144AA2RUR9 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC23.15■■□□□ 1.3
CCDC144AA2RUR9 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC23.15■■□□□ 1.3
CCDC144AA2RUR9 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC23.15■■□□□ 1.3
CCDC144AA2RUR9 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC144AA2RUR9 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC23.15■■□□□ 1.3
CCDC144AA2RUR9 TIMM17BP1-201ENST00000545713 516 ntBASIC23.15■■□□□ 1.3
CCDC144AA2RUR9 HNRNPUP1-201ENST00000554987 333 ntBASIC23.15■■□□□ 1.3
CCDC144AA2RUR9 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC23.15■■□□□ 1.3
CCDC144AA2RUR9 AC132938.2-201ENST00000579188 680 ntBASIC23.15■■□□□ 1.3
CCDC144AA2RUR9 AL591163.1-201ENST00000641757 987 ntBASIC23.15■■□□□ 1.3
CCDC144AA2RUR9 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CCDC144AA2RUR9 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
CCDC144AA2RUR9 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
CCDC144AA2RUR9 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
CCDC144AA2RUR9 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
CCDC144AA2RUR9 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC23.14■■□□□ 1.29
CCDC144AA2RUR9 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC144AA2RUR9 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC144AA2RUR9 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
CCDC144AA2RUR9 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC144AA2RUR9 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC144AA2RUR9 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC144AA2RUR9 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC23.14■■□□□ 1.29
CCDC144AA2RUR9 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
CCDC144AA2RUR9 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC23.14■■□□□ 1.29
CCDC144AA2RUR9 ATP5G2P4-201ENST00000442175 420 ntBASIC23.14■■□□□ 1.29
CCDC144AA2RUR9 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC23.14■■□□□ 1.29
CCDC144AA2RUR9 RN7SL837P-201ENST00000463010 287 ntBASIC23.14■■□□□ 1.29
CCDC144AA2RUR9 FADS2-205ENST00000517839 469 ntTSL 3 BASIC23.14■■□□□ 1.29
CCDC144AA2RUR9 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC23.14■■□□□ 1.29
CCDC144AA2RUR9 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
CCDC144AA2RUR9 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC23.14■■□□□ 1.29
CCDC144AA2RUR9 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC23.14■■□□□ 1.29
CCDC144AA2RUR9 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC144AA2RUR9 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC23.14■■□□□ 1.29
CCDC144AA2RUR9 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC144AA2RUR9 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC144AA2RUR9 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC144AA2RUR9 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms