Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Gm43045-201ENSMUST00000198725 2095 ntBASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Trav7n-4A0A075B620 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav7n-4A0A075B620 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Trav7n-4A0A075B620 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.02□□□□□ -0.8
Trav7n-4A0A075B620 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Trav7n-4A0A075B620 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.8
Trav7n-4A0A075B620 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav7n-4A0A075B620 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav7n-4A0A075B620 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav7n-4A0A075B620 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Gm3052-202ENSMUST00000188254 2224 ntBASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Gm6973-201ENSMUST00000117080 721 ntBASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Gm6222-201ENSMUST00000120787 396 ntBASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Ighv8-7-201ENSMUST00000194349 297 ntBASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Gm45841-201ENSMUST00000207700 164 ntBASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 AC090659.1-201ENSMUST00000224334 768 ntBASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 CT030684.1-201ENSMUST00000227292 914 ntBASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Gm3695-201ENSMUST00000087222 1009 ntBASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav7n-4A0A075B620 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav7n-4A0A075B620 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav7n-4A0A075B620 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav7n-4A0A075B620 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav7n-4A0A075B620 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.01□□□□□ -0.81
Trav7n-4A0A075B620 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav7n-4A0A075B620 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav7n-4A0A075B620 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav7n-4A0A075B620 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.01□□□□□ -0.81
Trav7n-4A0A075B620 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav7n-4A0A075B620 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav7n-4A0A075B620 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC10.01□□□□□ -0.81
Trav7n-4A0A075B620 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav7n-4A0A075B620 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav7n-4A0A075B620 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav7n-4A0A075B620 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav7n-4A0A075B620 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav7n-4A0A075B620 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav7n-4A0A075B620 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav7n-4A0A075B620 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav7n-4A0A075B620 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav7n-4A0A075B620 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Trav7n-4A0A075B620 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav7n-4A0A075B620 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.01□□□□□ -0.81
Trav7n-4A0A075B620 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav7n-4A0A075B620 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav7n-4A0A075B620 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav7n-4A0A075B620 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav7n-4A0A075B620 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav7n-4A0A075B620 Gm6539-201ENSMUST00000119157 1064 ntBASIC10.01□□□□□ -0.81
Trav7n-4A0A075B620 Gm7862-201ENSMUST00000121461 292 ntBASIC10.01□□□□□ -0.81
Trav7n-4A0A075B620 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav7n-4A0A075B620 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
Trav7n-4A0A075B620 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms