Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 Gm12859-201ENSMUST00000117834 427 ntBASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 Gm15376-201ENSMUST00000122258 783 ntBASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.27□□□□□ -0.44
ClcnkaQ9WUB7 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ClcnkaQ9WUB7 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ClcnkaQ9WUB7 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
ClcnkaQ9WUB7 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
ClcnkaQ9WUB7 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ClcnkaQ9WUB7 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
ClcnkaQ9WUB7 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.27□□□□□ -0.44
ClcnkaQ9WUB7 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
ClcnkaQ9WUB7 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.27□□□□□ -0.44
ClcnkaQ9WUB7 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClcnkaQ9WUB7 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
ClcnkaQ9WUB7 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClcnkaQ9WUB7 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClcnkaQ9WUB7 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.27□□□□□ -0.45
ClcnkaQ9WUB7 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.27□□□□□ -0.45
ClcnkaQ9WUB7 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ClcnkaQ9WUB7 Gm26464-201ENSMUST00000157094 305 ntBASIC12.27□□□□□ -0.45
ClcnkaQ9WUB7 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.27□□□□□ -0.45
ClcnkaQ9WUB7 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
ClcnkaQ9WUB7 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
ClcnkaQ9WUB7 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
ClcnkaQ9WUB7 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClcnkaQ9WUB7 Gm17330-201ENSMUST00000221047 165 ntBASIC12.27□□□□□ -0.45
ClcnkaQ9WUB7 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClcnkaQ9WUB7 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
ClcnkaQ9WUB7 Gm5161-201ENSMUST00000075243 853 ntBASIC12.27□□□□□ -0.45
ClcnkaQ9WUB7 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClcnkaQ9WUB7 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClcnkaQ9WUB7 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ClcnkaQ9WUB7 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
ClcnkaQ9WUB7 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ClcnkaQ9WUB7 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ClcnkaQ9WUB7 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClcnkaQ9WUB7 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.27□□□□□ -0.45
ClcnkaQ9WUB7 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClcnkaQ9WUB7 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClcnkaQ9WUB7 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClcnkaQ9WUB7 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClcnkaQ9WUB7 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
ClcnkaQ9WUB7 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClcnkaQ9WUB7 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ClcnkaQ9WUB7 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ClcnkaQ9WUB7 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClcnkaQ9WUB7 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClcnkaQ9WUB7 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
ClcnkaQ9WUB7 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClcnkaQ9WUB7 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.26□□□□□ -0.45
ClcnkaQ9WUB7 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
ClcnkaQ9WUB7 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClcnkaQ9WUB7 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
ClcnkaQ9WUB7 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClcnkaQ9WUB7 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ClcnkaQ9WUB7 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ClcnkaQ9WUB7 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.26□□□□□ -0.45
ClcnkaQ9WUB7 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ClcnkaQ9WUB7 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ClcnkaQ9WUB7 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClcnkaQ9WUB7 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClcnkaQ9WUB7 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClcnkaQ9WUB7 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.26□□□□□ -0.45
ClcnkaQ9WUB7 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ClcnkaQ9WUB7 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClcnkaQ9WUB7 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.26□□□□□ -0.45
ClcnkaQ9WUB7 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
ClcnkaQ9WUB7 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms