Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx28Q9CWT6 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
Ddx28Q9CWT6 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx28Q9CWT6 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx28Q9CWT6 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx28Q9CWT6 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ddx28Q9CWT6 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx28Q9CWT6 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx28Q9CWT6 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.49□□□□□ -0.41
Ddx28Q9CWT6 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Ddx28Q9CWT6 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx28Q9CWT6 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx28Q9CWT6 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ddx28Q9CWT6 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.49□□□□□ -0.41
Ddx28Q9CWT6 Gm15460-201ENSMUST00000118147 391 ntBASIC12.49□□□□□ -0.41
Ddx28Q9CWT6 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.49□□□□□ -0.41
Ddx28Q9CWT6 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.49□□□□□ -0.41
Ddx28Q9CWT6 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.49□□□□□ -0.41
Ddx28Q9CWT6 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Ddx28Q9CWT6 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx28Q9CWT6 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.49□□□□□ -0.41
Ddx28Q9CWT6 Gm46209-201ENSMUST00000217912 553 ntBASIC12.49□□□□□ -0.41
Ddx28Q9CWT6 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx28Q9CWT6 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx28Q9CWT6 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ddx28Q9CWT6 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx28Q9CWT6 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx28Q9CWT6 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx28Q9CWT6 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx28Q9CWT6 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx28Q9CWT6 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx28Q9CWT6 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx28Q9CWT6 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx28Q9CWT6 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ddx28Q9CWT6 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx28Q9CWT6 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 Gm14767-201ENSMUST00000121559 586 ntBASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 Auts2-212ENSMUST00000178555 309 ntBASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 Gm17837-201ENSMUST00000186435 985 ntBASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx28Q9CWT6 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx28Q9CWT6 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx28Q9CWT6 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.47□□□□□ -0.41
Ddx28Q9CWT6 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.47□□□□□ -0.41
Ddx28Q9CWT6 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx28Q9CWT6 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx28Q9CWT6 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx28Q9CWT6 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx28Q9CWT6 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx28Q9CWT6 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx28Q9CWT6 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx28Q9CWT6 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx28Q9CWT6 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx28Q9CWT6 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx28Q9CWT6 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx28Q9CWT6 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx28Q9CWT6 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx28Q9CWT6 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx28Q9CWT6 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Ddx28Q9CWT6 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx28Q9CWT6 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ddx28Q9CWT6 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx28Q9CWT6 Gm27321-201ENSMUST00000185021 205 ntBASIC12.47□□□□□ -0.41
Ddx28Q9CWT6 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.47□□□□□ -0.41
Ddx28Q9CWT6 Gm44344-201ENSMUST00000200287 129 ntBASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms