Protein–RNA interactions for Protein: Q9CPW3

Mrpl54, 39S ribosomal protein L54, mitochondrial, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl54Q9CPW3 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Mrpl54Q9CPW3 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Mrpl54Q9CPW3 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Mrpl54Q9CPW3 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Mrpl54Q9CPW3 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Mrpl54Q9CPW3 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Mrpl54Q9CPW3 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Mrpl54Q9CPW3 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Mrpl54Q9CPW3 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Mrpl54Q9CPW3 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Mrpl54Q9CPW3 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Mrpl54Q9CPW3 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Mrpl54Q9CPW3 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Gm7153-201ENSMUST00000117092 455 ntBASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Gm13036-201ENSMUST00000117799 748 ntBASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Gm6222-201ENSMUST00000120787 396 ntBASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl54Q9CPW3 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 Gm6973-201ENSMUST00000117080 721 ntBASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 Gm42934-201ENSMUST00000196920 1345 ntBASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Mrpl54Q9CPW3 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms