Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ska1Q9CPV1 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ska1Q9CPV1 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ska1Q9CPV1 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ska1Q9CPV1 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ska1Q9CPV1 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Ska1Q9CPV1 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ska1Q9CPV1 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ska1Q9CPV1 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ska1Q9CPV1 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.6□□□□□ -0.39
Ska1Q9CPV1 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Gm15460-201ENSMUST00000118147 391 ntBASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Gm12428-201ENSMUST00000119844 727 ntBASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Gm4804-201ENSMUST00000182234 999 ntBASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Gm27533-201ENSMUST00000183800 152 ntBASIC12.59□□□□□ -0.39
Ska1Q9CPV1 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ska1Q9CPV1 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Ska1Q9CPV1 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ska1Q9CPV1 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ska1Q9CPV1 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ska1Q9CPV1 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.58□□□□□ -0.39
Ska1Q9CPV1 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.58□□□□□ -0.39
Ska1Q9CPV1 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ska1Q9CPV1 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Ska1Q9CPV1 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Ska1Q9CPV1 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ska1Q9CPV1 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ska1Q9CPV1 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Ska1Q9CPV1 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ska1Q9CPV1 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ska1Q9CPV1 Gm15393-201ENSMUST00000120499 219 ntBASIC12.58□□□□□ -0.4
Ska1Q9CPV1 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ska1Q9CPV1 Gm21470-201ENSMUST00000187680 696 ntBASIC12.58□□□□□ -0.4
Ska1Q9CPV1 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.58□□□□□ -0.4
Ska1Q9CPV1 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ska1Q9CPV1 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ska1Q9CPV1 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ska1Q9CPV1 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ska1Q9CPV1 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ska1Q9CPV1 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.58□□□□□ -0.4
Ska1Q9CPV1 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.58□□□□□ -0.4
Ska1Q9CPV1 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ska1Q9CPV1 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ska1Q9CPV1 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.58□□□□□ -0.4
Ska1Q9CPV1 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ska1Q9CPV1 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ska1Q9CPV1 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.58□□□□□ -0.4
Ska1Q9CPV1 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ska1Q9CPV1 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ska1Q9CPV1 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ska1Q9CPV1 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.58□□□□□ -0.4
Ska1Q9CPV1 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ska1Q9CPV1 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ska1Q9CPV1 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ska1Q9CPV1 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ska1Q9CPV1 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms