Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Gm12742-201ENSMUST00000117326 410 ntBASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Gm12957-201ENSMUST00000117835 377 ntBASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Gm12403-201ENSMUST00000121384 959 ntBASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Gm24644-201ENSMUST00000157114 139 ntBASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Gm45784-201ENSMUST00000188360 142 ntBASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Gm43630-201ENSMUST00000201550 776 ntBASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Itm2b-204ENSMUST00000228637 783 ntBASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ndc1Q8VCB1 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Gm14660-201ENSMUST00000119809 575 ntBASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Gm11803-201ENSMUST00000119966 444 ntBASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Gm27731-201ENSMUST00000185192 107 ntBASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Gm29127-201ENSMUST00000188304 517 ntBASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Gm38144-201ENSMUST00000192790 465 ntBASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Gm8598-201ENSMUST00000221184 836 ntBASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Gm26315-201ENSMUST00000083890 321 ntBASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ndc1Q8VCB1 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms