Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup58Q8R332 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup58Q8R332 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Nup58Q8R332 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Nup58Q8R332 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nup58Q8R332 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nup58Q8R332 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup58Q8R332 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup58Q8R332 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Nup58Q8R332 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup58Q8R332 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.28□□□□□ -0.12
Nup58Q8R332 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup58Q8R332 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup58Q8R332 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.28□□□□□ -0.12
Nup58Q8R332 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Nup58Q8R332 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup58Q8R332 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup58Q8R332 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup58Q8R332 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.28□□□□□ -0.12
Nup58Q8R332 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Nup58Q8R332 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.28□□□□□ -0.12
Nup58Q8R332 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.28□□□□□ -0.12
Nup58Q8R332 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.28□□□□□ -0.12
Nup58Q8R332 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup58Q8R332 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nup58Q8R332 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup58Q8R332 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup58Q8R332 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nup58Q8R332 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup58Q8R332 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.28□□□□□ -0.12
Nup58Q8R332 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Nup58Q8R332 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.28□□□□□ -0.12
Nup58Q8R332 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup58Q8R332 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Nup58Q8R332 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nup58Q8R332 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nup58Q8R332 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nup58Q8R332 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nup58Q8R332 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.27□□□□□ -0.12
Nup58Q8R332 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nup58Q8R332 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nup58Q8R332 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nup58Q8R332 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nup58Q8R332 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Nup58Q8R332 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Nup58Q8R332 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nup58Q8R332 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nup58Q8R332 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Nup58Q8R332 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup58Q8R332 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.27□□□□□ -0.13
Nup58Q8R332 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup58Q8R332 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.27□□□□□ -0.13
Nup58Q8R332 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nup58Q8R332 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup58Q8R332 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nup58Q8R332 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup58Q8R332 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.27□□□□□ -0.13
Nup58Q8R332 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup58Q8R332 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup58Q8R332 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Nup58Q8R332 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup58Q8R332 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nup58Q8R332 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup58Q8R332 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup58Q8R332 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup58Q8R332 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.27□□□□□ -0.13
Nup58Q8R332 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.27□□□□□ -0.13
Nup58Q8R332 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.27□□□□□ -0.13
Nup58Q8R332 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup58Q8R332 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup58Q8R332 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup58Q8R332 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup58Q8R332 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup58Q8R332 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup58Q8R332 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup58Q8R332 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup58Q8R332 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup58Q8R332 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup58Q8R332 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup58Q8R332 Gm45643-201ENSMUST00000211364 1484 ntBASIC14.26□□□□□ -0.13
Nup58Q8R332 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup58Q8R332 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup58Q8R332 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Nup58Q8R332 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nup58Q8R332 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nup58Q8R332 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup58Q8R332 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.26□□□□□ -0.13
Nup58Q8R332 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nup58Q8R332 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nup58Q8R332 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup58Q8R332 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nup58Q8R332 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Nup58Q8R332 Gm24694-201ENSMUST00000180054 110 ntBASIC14.26□□□□□ -0.13
Nup58Q8R332 Gm27663-201ENSMUST00000184839 110 ntBASIC14.26□□□□□ -0.13
Nup58Q8R332 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.26□□□□□ -0.13
Nup58Q8R332 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Nup58Q8R332 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup58Q8R332 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup58Q8R332 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup58Q8R332 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms