Protein–RNA interactions for Protein: Q80UJ7

Rab3gap1, Rab3 GTPase-activating protein catalytic subunit, mousemouse

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab3gap1Q80UJ7 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rab3gap1Q80UJ7 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Rab3gap1Q80UJ7 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rab3gap1Q80UJ7 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rab3gap1Q80UJ7 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rab3gap1Q80UJ7 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab3gap1Q80UJ7 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab3gap1Q80UJ7 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab3gap1Q80UJ7 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab3gap1Q80UJ7 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rab3gap1Q80UJ7 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab3gap1Q80UJ7 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab3gap1Q80UJ7 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rab3gap1Q80UJ7 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC16.16■□□□□ 0.18
Rab3gap1Q80UJ7 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC16.16■□□□□ 0.18
Rab3gap1Q80UJ7 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC16.16■□□□□ 0.18
Rab3gap1Q80UJ7 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rab3gap1Q80UJ7 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
Rab3gap1Q80UJ7 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC16.16■□□□□ 0.18
Rab3gap1Q80UJ7 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab3gap1Q80UJ7 Gm19184-201ENSMUST00000196798 928 ntBASIC16.16■□□□□ 0.18
Rab3gap1Q80UJ7 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC16.16■□□□□ 0.18
Rab3gap1Q80UJ7 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab3gap1Q80UJ7 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab3gap1Q80UJ7 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rab3gap1Q80UJ7 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rab3gap1Q80UJ7 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab3gap1Q80UJ7 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab3gap1Q80UJ7 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab3gap1Q80UJ7 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rab3gap1Q80UJ7 Acot6-202ENSMUST00000222921 3622 ntBASIC16.16■□□□□ 0.18
Rab3gap1Q80UJ7 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Rab3gap1Q80UJ7 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rab3gap1Q80UJ7 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rab3gap1Q80UJ7 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab3gap1Q80UJ7 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab3gap1Q80UJ7 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rab3gap1Q80UJ7 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab3gap1Q80UJ7 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab3gap1Q80UJ7 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC16.16■□□□□ 0.18
Rab3gap1Q80UJ7 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab3gap1Q80UJ7 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rab3gap1Q80UJ7 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rab3gap1Q80UJ7 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab3gap1Q80UJ7 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rab3gap1Q80UJ7 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab3gap1Q80UJ7 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab3gap1Q80UJ7 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rab3gap1Q80UJ7 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rab3gap1Q80UJ7 Gm42853-201ENSMUST00000201273 1387 ntBASIC16.15■□□□□ 0.18
Rab3gap1Q80UJ7 Gm38094-201ENSMUST00000195864 2978 ntBASIC16.15■□□□□ 0.18
Rab3gap1Q80UJ7 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab3gap1Q80UJ7 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab3gap1Q80UJ7 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rab3gap1Q80UJ7 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab3gap1Q80UJ7 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rab3gap1Q80UJ7 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC16.15■□□□□ 0.18
Rab3gap1Q80UJ7 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rab3gap1Q80UJ7 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rab3gap1Q80UJ7 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Rab3gap1Q80UJ7 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab3gap1Q80UJ7 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC16.15■□□□□ 0.18
Rab3gap1Q80UJ7 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rab3gap1Q80UJ7 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab3gap1Q80UJ7 Tyms-ps-201ENSMUST00000219550 915 ntBASIC16.15■□□□□ 0.18
Rab3gap1Q80UJ7 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab3gap1Q80UJ7 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab3gap1Q80UJ7 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rab3gap1Q80UJ7 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab3gap1Q80UJ7 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab3gap1Q80UJ7 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab3gap1Q80UJ7 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab3gap1Q80UJ7 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC16.15■□□□□ 0.18
Rab3gap1Q80UJ7 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
Rab3gap1Q80UJ7 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab3gap1Q80UJ7 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab3gap1Q80UJ7 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab3gap1Q80UJ7 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Rab3gap1Q80UJ7 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
Rab3gap1Q80UJ7 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Rab3gap1Q80UJ7 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Rab3gap1Q80UJ7 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Rab3gap1Q80UJ7 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab3gap1Q80UJ7 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab3gap1Q80UJ7 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab3gap1Q80UJ7 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab3gap1Q80UJ7 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab3gap1Q80UJ7 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab3gap1Q80UJ7 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab3gap1Q80UJ7 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab3gap1Q80UJ7 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rab3gap1Q80UJ7 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rab3gap1Q80UJ7 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab3gap1Q80UJ7 Gm15198-201ENSMUST00000117283 177 ntBASIC16.14■□□□□ 0.17
Rab3gap1Q80UJ7 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rab3gap1Q80UJ7 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab3gap1Q80UJ7 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rab3gap1Q80UJ7 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rab3gap1Q80UJ7 AC159896.2-201ENSMUST00000214753 269 ntBASIC16.14■□□□□ 0.17
Rab3gap1Q80UJ7 AC154319.1-201ENSMUST00000216330 312 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms