Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 Gm8062-201ENSMUST00000139696 444 ntBASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 Gm5370-201ENSMUST00000187187 574 ntBASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh19Q80TF3 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Pcdh19Q80TF3 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh19Q80TF3 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Pcdh19Q80TF3 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh19Q80TF3 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh19Q80TF3 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh19Q80TF3 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh19Q80TF3 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh19Q80TF3 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh19Q80TF3 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh19Q80TF3 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh19Q80TF3 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.04□□□□□ -0.32
Pcdh19Q80TF3 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh19Q80TF3 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh19Q80TF3 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh19Q80TF3 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh19Q80TF3 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh19Q80TF3 Gm14350-201ENSMUST00000116642 640 ntBASIC13.04□□□□□ -0.32
Pcdh19Q80TF3 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Pcdh19Q80TF3 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Pcdh19Q80TF3 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh19Q80TF3 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.04□□□□□ -0.32
Pcdh19Q80TF3 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.04□□□□□ -0.32
Pcdh19Q80TF3 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.04□□□□□ -0.32
Pcdh19Q80TF3 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Pcdh19Q80TF3 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.04□□□□□ -0.32
Pcdh19Q80TF3 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh19Q80TF3 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh19Q80TF3 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Pcdh19Q80TF3 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh19Q80TF3 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh19Q80TF3 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh19Q80TF3 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pcdh19Q80TF3 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Pcdh19Q80TF3 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh19Q80TF3 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh19Q80TF3 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh19Q80TF3 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh19Q80TF3 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 Gm13369-201ENSMUST00000119442 987 ntBASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 Gm16177-201ENSMUST00000120728 718 ntBASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 Gm37424-201ENSMUST00000191727 561 ntBASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms