Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Ddx55Q6ZPL9 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Ddx55Q6ZPL9 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ddx55Q6ZPL9 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Ddx55Q6ZPL9 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx55Q6ZPL9 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ddx55Q6ZPL9 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx55Q6ZPL9 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx55Q6ZPL9 Gm4760-201ENSMUST00000119663 1030 ntBASIC15.05■□□□□ -0
Ddx55Q6ZPL9 Gm13875-201ENSMUST00000120162 282 ntBASIC15.05■□□□□ -0
Ddx55Q6ZPL9 Gm12566-201ENSMUST00000121479 359 ntBASIC15.05■□□□□ -0
Ddx55Q6ZPL9 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC15.05■□□□□ -0
Ddx55Q6ZPL9 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC15.05■□□□□ -0
Ddx55Q6ZPL9 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC15.05■□□□□ -0
Ddx55Q6ZPL9 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC15.05■□□□□ -0
Ddx55Q6ZPL9 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC15.05■□□□□ -0
Ddx55Q6ZPL9 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC15.05■□□□□ -0
Ddx55Q6ZPL9 Gm19208-201ENSMUST00000213861 912 ntBASIC15.05■□□□□ -0
Ddx55Q6ZPL9 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx55Q6ZPL9 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx55Q6ZPL9 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx55Q6ZPL9 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx55Q6ZPL9 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx55Q6ZPL9 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx55Q6ZPL9 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx55Q6ZPL9 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx55Q6ZPL9 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Ddx55Q6ZPL9 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx55Q6ZPL9 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx55Q6ZPL9 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx55Q6ZPL9 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx55Q6ZPL9 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx55Q6ZPL9 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ddx55Q6ZPL9 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.04■□□□□ -0
Ddx55Q6ZPL9 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx55Q6ZPL9 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx55Q6ZPL9 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.04■□□□□ -0
Ddx55Q6ZPL9 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx55Q6ZPL9 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx55Q6ZPL9 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC15.04■□□□□ -0
Ddx55Q6ZPL9 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ddx55Q6ZPL9 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx55Q6ZPL9 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx55Q6ZPL9 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ddx55Q6ZPL9 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx55Q6ZPL9 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx55Q6ZPL9 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Ddx55Q6ZPL9 Gm14704-201ENSMUST00000120300 874 ntBASIC15.04■□□□□ -0
Ddx55Q6ZPL9 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx55Q6ZPL9 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ddx55Q6ZPL9 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC15.04■□□□□ -0
Ddx55Q6ZPL9 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC15.04■□□□□ -0
Ddx55Q6ZPL9 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ddx55Q6ZPL9 AC166051.1-201ENSMUST00000214313 210 ntBASIC15.04■□□□□ -0
Ddx55Q6ZPL9 AC154595.3-201ENSMUST00000224579 384 ntBASIC15.04■□□□□ -0
Ddx55Q6ZPL9 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx55Q6ZPL9 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ddx55Q6ZPL9 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx55Q6ZPL9 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx55Q6ZPL9 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx55Q6ZPL9 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx55Q6ZPL9 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx55Q6ZPL9 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.04■□□□□ -0
Ddx55Q6ZPL9 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ddx55Q6ZPL9 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx55Q6ZPL9 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ddx55Q6ZPL9 Gm37737-201ENSMUST00000195013 1638 ntBASIC15.03■□□□□ -0
Ddx55Q6ZPL9 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx55Q6ZPL9 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Ddx55Q6ZPL9 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx55Q6ZPL9 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ddx55Q6ZPL9 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx55Q6ZPL9 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx55Q6ZPL9 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC15.03■□□□□ -0
Ddx55Q6ZPL9 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx55Q6ZPL9 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx55Q6ZPL9 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ddx55Q6ZPL9 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ddx55Q6ZPL9 Gm14208-201ENSMUST00000119645 678 ntBASIC15.03■□□□□ -0
Ddx55Q6ZPL9 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ddx55Q6ZPL9 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx55Q6ZPL9 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx55Q6ZPL9 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ddx55Q6ZPL9 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ddx55Q6ZPL9 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC15.03■□□□□ -0
Ddx55Q6ZPL9 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC15.03■□□□□ -0
Ddx55Q6ZPL9 Gm5904-201ENSMUST00000210286 865 ntBASIC15.03■□□□□ -0
Ddx55Q6ZPL9 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC15.03■□□□□ -0
Ddx55Q6ZPL9 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx55Q6ZPL9 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx55Q6ZPL9 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx55Q6ZPL9 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx55Q6ZPL9 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ddx55Q6ZPL9 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx55Q6ZPL9 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx55Q6ZPL9 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ddx55Q6ZPL9 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.03■□□□□ -0
Ddx55Q6ZPL9 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Ddx55Q6ZPL9 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx55Q6ZPL9 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms