Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Gm6580-201ENSMUST00000117504 1357 ntBASIC14.18□□□□□ -0.14
ShbQ6PD21 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ShbQ6PD21 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.18□□□□□ -0.14
ShbQ6PD21 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ShbQ6PD21 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ShbQ6PD21 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ShbQ6PD21 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.18□□□□□ -0.14
ShbQ6PD21 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ShbQ6PD21 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
ShbQ6PD21 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ShbQ6PD21 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ShbQ6PD21 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ShbQ6PD21 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ShbQ6PD21 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC14.17□□□□□ -0.14
ShbQ6PD21 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ShbQ6PD21 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.17□□□□□ -0.14
ShbQ6PD21 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ShbQ6PD21 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ShbQ6PD21 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ShbQ6PD21 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ShbQ6PD21 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ShbQ6PD21 Gm8018-201ENSMUST00000173536 789 ntBASIC14.17□□□□□ -0.14
ShbQ6PD21 AY036118-201ENSMUST00000200021 923 ntBASIC14.17□□□□□ -0.14
ShbQ6PD21 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
ShbQ6PD21 AC159205.5-202ENSMUST00000224849 386 ntBASIC14.17□□□□□ -0.14
ShbQ6PD21 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ShbQ6PD21 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ShbQ6PD21 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ShbQ6PD21 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
ShbQ6PD21 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ShbQ6PD21 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ShbQ6PD21 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ShbQ6PD21 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ShbQ6PD21 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ShbQ6PD21 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ShbQ6PD21 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ShbQ6PD21 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ShbQ6PD21 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
ShbQ6PD21 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
ShbQ6PD21 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ShbQ6PD21 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ShbQ6PD21 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ShbQ6PD21 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ShbQ6PD21 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ShbQ6PD21 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
ShbQ6PD21 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ShbQ6PD21 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
ShbQ6PD21 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ShbQ6PD21 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.16□□□□□ -0.14
ShbQ6PD21 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.16□□□□□ -0.14
ShbQ6PD21 Gm14999-201ENSMUST00000121039 624 ntBASIC14.16□□□□□ -0.14
ShbQ6PD21 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC14.16□□□□□ -0.14
ShbQ6PD21 Gm14460-201ENSMUST00000121511 639 ntBASIC14.16□□□□□ -0.14
ShbQ6PD21 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC14.16□□□□□ -0.14
ShbQ6PD21 Gm12134-201ENSMUST00000122109 520 ntBASIC14.16□□□□□ -0.14
ShbQ6PD21 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC14.16□□□□□ -0.14
ShbQ6PD21 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC14.16□□□□□ -0.14
ShbQ6PD21 Gm10051-201ENSMUST00000145209 414 ntBASIC14.16□□□□□ -0.14
ShbQ6PD21 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.16□□□□□ -0.14
ShbQ6PD21 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.16□□□□□ -0.14
ShbQ6PD21 Gm18893-201ENSMUST00000198416 943 ntBASIC14.16□□□□□ -0.14
ShbQ6PD21 Gm4607-201ENSMUST00000206649 577 ntBASIC14.16□□□□□ -0.14
ShbQ6PD21 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC14.16□□□□□ -0.14
ShbQ6PD21 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ShbQ6PD21 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ShbQ6PD21 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC14.16□□□□□ -0.14
ShbQ6PD21 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
ShbQ6PD21 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ShbQ6PD21 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
ShbQ6PD21 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ShbQ6PD21 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ShbQ6PD21 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
ShbQ6PD21 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ShbQ6PD21 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ShbQ6PD21 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ShbQ6PD21 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.16□□□□□ -0.14
ShbQ6PD21 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.16□□□□□ -0.14
ShbQ6PD21 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC14.15□□□□□ -0.14
ShbQ6PD21 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ShbQ6PD21 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.15□□□□□ -0.14
ShbQ6PD21 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ShbQ6PD21 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ShbQ6PD21 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.15□□□□□ -0.14
ShbQ6PD21 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ShbQ6PD21 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ShbQ6PD21 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ShbQ6PD21 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ShbQ6PD21 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
ShbQ6PD21 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ShbQ6PD21 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ShbQ6PD21 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC14.15□□□□□ -0.14
ShbQ6PD21 Gm14644-201ENSMUST00000116671 647 ntBASIC14.15□□□□□ -0.14
ShbQ6PD21 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC14.15□□□□□ -0.14
ShbQ6PD21 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.15□□□□□ -0.14
ShbQ6PD21 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ShbQ6PD21 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC14.15□□□□□ -0.14
ShbQ6PD21 Gm43916-201ENSMUST00000205062 967 ntBASIC14.15□□□□□ -0.14
ShbQ6PD21 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ShbQ6PD21 Gm19187-201ENSMUST00000206781 892 ntBASIC14.15□□□□□ -0.14
ShbQ6PD21 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms