Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.46□□□□□ -0.41
Sox17Q61473 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Sox17Q61473 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox17Q61473 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox17Q61473 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox17Q61473 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Sox17Q61473 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox17Q61473 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox17Q61473 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox17Q61473 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox17Q61473 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Sox17Q61473 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Sox17Q61473 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox17Q61473 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox17Q61473 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Sox17Q61473 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox17Q61473 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.46□□□□□ -0.42
Sox17Q61473 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox17Q61473 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.42
Sox17Q61473 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox17Q61473 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.46□□□□□ -0.42
Sox17Q61473 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox17Q61473 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Sox17Q61473 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox17Q61473 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox17Q61473 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox17Q61473 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox17Q61473 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox17Q61473 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox17Q61473 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox17Q61473 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox17Q61473 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox17Q61473 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox17Q61473 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox17Q61473 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Sox17Q61473 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox17Q61473 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox17Q61473 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox17Q61473 Gm15460-201ENSMUST00000118147 391 ntBASIC12.45□□□□□ -0.42
Sox17Q61473 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.45□□□□□ -0.42
Sox17Q61473 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox17Q61473 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.45□□□□□ -0.42
Sox17Q61473 Gm21470-201ENSMUST00000187680 696 ntBASIC12.45□□□□□ -0.42
Sox17Q61473 Gm33320-201ENSMUST00000192232 530 ntBASIC12.45□□□□□ -0.42
Sox17Q61473 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.45□□□□□ -0.42
Sox17Q61473 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.45□□□□□ -0.42
Sox17Q61473 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.45□□□□□ -0.42
Sox17Q61473 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.45□□□□□ -0.42
Sox17Q61473 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox17Q61473 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox17Q61473 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Sox17Q61473 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox17Q61473 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox17Q61473 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox17Q61473 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox17Q61473 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Sox17Q61473 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.45□□□□□ -0.42
Sox17Q61473 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Sox17Q61473 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox17Q61473 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Sox17Q61473 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox17Q61473 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.45□□□□□ -0.42
Sox17Q61473 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox17Q61473 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox17Q61473 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox17Q61473 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox17Q61473 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox17Q61473 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox17Q61473 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.44□□□□□ -0.42
Sox17Q61473 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Sox17Q61473 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox17Q61473 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Sox17Q61473 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox17Q61473 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox17Q61473 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox17Q61473 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox17Q61473 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Sox17Q61473 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox17Q61473 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox17Q61473 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox17Q61473 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox17Q61473 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox17Q61473 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Sox17Q61473 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Sox17Q61473 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox17Q61473 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox17Q61473 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC12.44□□□□□ -0.42
Sox17Q61473 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.44□□□□□ -0.42
Sox17Q61473 Gm9824-201ENSMUST00000178707 561 ntBASIC12.44□□□□□ -0.42
Sox17Q61473 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Sox17Q61473 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.44□□□□□ -0.42
Sox17Q61473 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.44□□□□□ -0.42
Sox17Q61473 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox17Q61473 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox17Q61473 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox17Q61473 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox17Q61473 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.44□□□□□ -0.42
Sox17Q61473 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox17Q61473 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Sox17Q61473 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms