Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim38Q5SZ99 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim38Q5SZ99 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim38Q5SZ99 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.82□□□□□ -0.2
Trim38Q5SZ99 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.82□□□□□ -0.2
Trim38Q5SZ99 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.82□□□□□ -0.2
Trim38Q5SZ99 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim38Q5SZ99 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim38Q5SZ99 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim38Q5SZ99 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim38Q5SZ99 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Syt7-205ENSMUST00000224135 1557 ntBASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Gm15371-201ENSMUST00000117057 784 ntBASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.81□□□□□ -0.2
Trim38Q5SZ99 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Gm28631-201ENSMUST00000190740 334 ntBASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Gm38223-201ENSMUST00000194484 695 ntBASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Gm6218-201ENSMUST00000219812 628 ntBASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim38Q5SZ99 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim38Q5SZ99 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim38Q5SZ99 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim38Q5SZ99 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim38Q5SZ99 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim38Q5SZ99 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim38Q5SZ99 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim38Q5SZ99 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim38Q5SZ99 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.8□□□□□ -0.2
Trim38Q5SZ99 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.8□□□□□ -0.2
Trim38Q5SZ99 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim38Q5SZ99 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim38Q5SZ99 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim38Q5SZ99 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trim38Q5SZ99 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim38Q5SZ99 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.8□□□□□ -0.2
Trim38Q5SZ99 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.8□□□□□ -0.2
Trim38Q5SZ99 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim38Q5SZ99 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim38Q5SZ99 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim38Q5SZ99 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.8□□□□□ -0.2
Trim38Q5SZ99 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.8□□□□□ -0.2
Trim38Q5SZ99 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trim38Q5SZ99 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim38Q5SZ99 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trim38Q5SZ99 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trim38Q5SZ99 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim38Q5SZ99 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim38Q5SZ99 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim38Q5SZ99 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim38Q5SZ99 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trim38Q5SZ99 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim38Q5SZ99 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms