Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Syne3Q4FZC9 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syne3Q4FZC9 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.15□□□□□ -0.14
Syne3Q4FZC9 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.15□□□□□ -0.14
Syne3Q4FZC9 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne3Q4FZC9 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Gm19078-201ENSMUST00000206311 727 ntBASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Gm18624-201ENSMUST00000220966 658 ntBASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Syne3Q4FZC9 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Syne3Q4FZC9 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne3Q4FZC9 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Syne3Q4FZC9 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Syne3Q4FZC9 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syne3Q4FZC9 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Syne3Q4FZC9 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.13□□□□□ -0.15
Syne3Q4FZC9 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syne3Q4FZC9 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syne3Q4FZC9 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syne3Q4FZC9 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Syne3Q4FZC9 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syne3Q4FZC9 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syne3Q4FZC9 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Syne3Q4FZC9 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Syne3Q4FZC9 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Syne3Q4FZC9 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syne3Q4FZC9 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.13□□□□□ -0.15
Syne3Q4FZC9 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Syne3Q4FZC9 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Syne3Q4FZC9 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syne3Q4FZC9 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Syne3Q4FZC9 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syne3Q4FZC9 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syne3Q4FZC9 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Syne3Q4FZC9 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Syne3Q4FZC9 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Syne3Q4FZC9 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Syne3Q4FZC9 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syne3Q4FZC9 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.13□□□□□ -0.15
Syne3Q4FZC9 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syne3Q4FZC9 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Gm12341-201ENSMUST00000119724 503 ntBASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms