Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col10a1Q05306 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Col10a1Q05306 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col10a1Q05306 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col10a1Q05306 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Col10a1Q05306 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col10a1Q05306 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col10a1Q05306 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Col10a1Q05306 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col10a1Q05306 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Col10a1Q05306 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.28□□□□□ -0.44
Col10a1Q05306 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col10a1Q05306 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col10a1Q05306 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col10a1Q05306 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col10a1Q05306 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.28□□□□□ -0.44
Col10a1Q05306 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Col10a1Q05306 Gm12928-201ENSMUST00000117115 573 ntBASIC12.28□□□□□ -0.44
Col10a1Q05306 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col10a1Q05306 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Col10a1Q05306 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.28□□□□□ -0.44
Col10a1Q05306 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.28□□□□□ -0.44
Col10a1Q05306 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col10a1Q05306 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Col10a1Q05306 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col10a1Q05306 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col10a1Q05306 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col10a1Q05306 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Col10a1Q05306 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col10a1Q05306 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Col10a1Q05306 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col10a1Q05306 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col10a1Q05306 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col10a1Q05306 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col10a1Q05306 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col10a1Q05306 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col10a1Q05306 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col10a1Q05306 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col10a1Q05306 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col10a1Q05306 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Col10a1Q05306 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col10a1Q05306 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col10a1Q05306 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.27□□□□□ -0.44
Col10a1Q05306 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col10a1Q05306 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Col10a1Q05306 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col10a1Q05306 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col10a1Q05306 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col10a1Q05306 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col10a1Q05306 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.27□□□□□ -0.44
Col10a1Q05306 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col10a1Q05306 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col10a1Q05306 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col10a1Q05306 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col10a1Q05306 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col10a1Q05306 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col10a1Q05306 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col10a1Q05306 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.27□□□□□ -0.45
Col10a1Q05306 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.27□□□□□ -0.45
Col10a1Q05306 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Col10a1Q05306 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Col10a1Q05306 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.27□□□□□ -0.45
Col10a1Q05306 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col10a1Q05306 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.27□□□□□ -0.45
Col10a1Q05306 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.27□□□□□ -0.45
Col10a1Q05306 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.27□□□□□ -0.45
Col10a1Q05306 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col10a1Q05306 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.27□□□□□ -0.45
Col10a1Q05306 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.27□□□□□ -0.45
Col10a1Q05306 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col10a1Q05306 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col10a1Q05306 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col10a1Q05306 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col10a1Q05306 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col10a1Q05306 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col10a1Q05306 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Col10a1Q05306 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col10a1Q05306 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col10a1Q05306 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col10a1Q05306 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col10a1Q05306 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col10a1Q05306 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.27□□□□□ -0.45
Col10a1Q05306 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col10a1Q05306 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Col10a1Q05306 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.27□□□□□ -0.45
Col10a1Q05306 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Col10a1Q05306 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col10a1Q05306 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Col10a1Q05306 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col10a1Q05306 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col10a1Q05306 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col10a1Q05306 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col10a1Q05306 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col10a1Q05306 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col10a1Q05306 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col10a1Q05306 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col10a1Q05306 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col10a1Q05306 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Col10a1Q05306 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Col10a1Q05306 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms