Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Gm26315-201ENSMUST00000083890 321 ntBASIC13.52□□□□□ -0.25
Gabpb1Q00420 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gabpb1Q00420 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gabpb1Q00420 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Gabpb1Q00420 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gabpb1Q00420 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.52□□□□□ -0.25
Gabpb1Q00420 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Gabpb1Q00420 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Gabpb1Q00420 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gabpb1Q00420 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gabpb1Q00420 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.52□□□□□ -0.25
Gabpb1Q00420 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gabpb1Q00420 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Gabpb1Q00420 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gabpb1Q00420 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gabpb1Q00420 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gabpb1Q00420 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gabpb1Q00420 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Gabpb1Q00420 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Gabpb1Q00420 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabpb1Q00420 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Gabpb1Q00420 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabpb1Q00420 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabpb1Q00420 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Gabpb1Q00420 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabpb1Q00420 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabpb1Q00420 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Gabpb1Q00420 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.51□□□□□ -0.25
Gabpb1Q00420 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabpb1Q00420 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabpb1Q00420 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.51□□□□□ -0.25
Gabpb1Q00420 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabpb1Q00420 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Gabpb1Q00420 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.51□□□□□ -0.25
Gabpb1Q00420 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.51□□□□□ -0.25
Gabpb1Q00420 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabpb1Q00420 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabpb1Q00420 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Gabpb1Q00420 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Gabpb1Q00420 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.51□□□□□ -0.25
Gabpb1Q00420 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabpb1Q00420 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabpb1Q00420 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Gabpb1Q00420 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabpb1Q00420 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabpb1Q00420 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Gabpb1Q00420 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Gabpb1Q00420 Gm19931-201ENSMUST00000198920 368 ntBASIC13.51□□□□□ -0.25
Gabpb1Q00420 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Gabpb1Q00420 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.51□□□□□ -0.25
Gabpb1Q00420 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabpb1Q00420 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Gabpb1Q00420 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Gabpb1Q00420 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.51□□□□□ -0.25
Gabpb1Q00420 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabpb1Q00420 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.51□□□□□ -0.25
Gabpb1Q00420 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.51□□□□□ -0.25
Gabpb1Q00420 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabpb1Q00420 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabpb1Q00420 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Gabpb1Q00420 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabpb1Q00420 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.51□□□□□ -0.25
Gabpb1Q00420 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Gabpb1Q00420 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Gabpb1Q00420 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.5□□□□□ -0.25
Gabpb1Q00420 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gabpb1Q00420 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gabpb1Q00420 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gabpb1Q00420 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Gabpb1Q00420 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gabpb1Q00420 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gabpb1Q00420 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Gabpb1Q00420 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gabpb1Q00420 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.5□□□□□ -0.25
Gabpb1Q00420 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Gabpb1Q00420 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gabpb1Q00420 Gm13689-201ENSMUST00000119360 685 ntBASIC13.5□□□□□ -0.25
Gabpb1Q00420 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.5□□□□□ -0.25
Gabpb1Q00420 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.5□□□□□ -0.25
Gabpb1Q00420 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.5□□□□□ -0.25
Gabpb1Q00420 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gabpb1Q00420 Gm2423-201ENSMUST00000074863 733 ntBASIC13.5□□□□□ -0.25
Gabpb1Q00420 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gabpb1Q00420 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gabpb1Q00420 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gabpb1Q00420 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gabpb1Q00420 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gabpb1Q00420 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gabpb1Q00420 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gabpb1Q00420 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gabpb1Q00420 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Gabpb1Q00420 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gabpb1Q00420 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gabpb1Q00420 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gabpb1Q00420 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Gabpb1Q00420 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gabpb1Q00420 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Gabpb1Q00420 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Gabpb1Q00420 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gabpb1Q00420 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms