Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sec61a1P61620 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sec61a1P61620 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sec61a1P61620 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Sec61a1P61620 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sec61a1P61620 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sec61a1P61620 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.75□□□□□ -0.53
Sec61a1P61620 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sec61a1P61620 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sec61a1P61620 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Sec61a1P61620 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sec61a1P61620 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sec61a1P61620 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sec61a1P61620 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sec61a1P61620 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sec61a1P61620 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sec61a1P61620 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61a1P61620 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61a1P61620 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61a1P61620 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61a1P61620 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Sec61a1P61620 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Sec61a1P61620 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
Sec61a1P61620 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61a1P61620 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61a1P61620 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61a1P61620 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Sec61a1P61620 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Sec61a1P61620 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Sec61a1P61620 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61a1P61620 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.74□□□□□ -0.53
Sec61a1P61620 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Sec61a1P61620 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.74□□□□□ -0.53
Sec61a1P61620 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.74□□□□□ -0.53
Sec61a1P61620 AC121804.3-201ENSMUST00000223420 295 ntBASIC11.74□□□□□ -0.53
Sec61a1P61620 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.74□□□□□ -0.53
Sec61a1P61620 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Sec61a1P61620 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61a1P61620 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61a1P61620 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61a1P61620 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61a1P61620 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.74□□□□□ -0.53
Sec61a1P61620 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.74□□□□□ -0.53
Sec61a1P61620 Gm45667-201ENSMUST00000210380 1316 ntBASIC11.74□□□□□ -0.53
Sec61a1P61620 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61a1P61620 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61a1P61620 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Sec61a1P61620 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61a1P61620 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61a1P61620 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61a1P61620 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.74□□□□□ -0.53
Sec61a1P61620 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61a1P61620 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.74□□□□□ -0.53
Sec61a1P61620 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61a1P61620 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a1P61620 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a1P61620 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Sec61a1P61620 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Sec61a1P61620 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a1P61620 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a1P61620 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a1P61620 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a1P61620 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a1P61620 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Sec61a1P61620 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a1P61620 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a1P61620 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.73□□□□□ -0.53
Sec61a1P61620 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Sec61a1P61620 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Sec61a1P61620 Gm3436-201ENSMUST00000179930 840 ntBASIC11.73□□□□□ -0.53
Sec61a1P61620 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Sec61a1P61620 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.73□□□□□ -0.53
Sec61a1P61620 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Sec61a1P61620 Gm29667-201ENSMUST00000190817 490 ntBASIC11.73□□□□□ -0.53
Sec61a1P61620 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a1P61620 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a1P61620 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC11.73□□□□□ -0.53
Sec61a1P61620 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a1P61620 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a1P61620 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.73□□□□□ -0.53
Sec61a1P61620 Gm7730-201ENSMUST00000212486 454 ntBASIC11.73□□□□□ -0.53
Sec61a1P61620 Gm9229-201ENSMUST00000222777 126 ntBASIC11.73□□□□□ -0.53
Sec61a1P61620 Syt7-205ENSMUST00000224135 1557 ntBASIC11.73□□□□□ -0.53
Sec61a1P61620 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a1P61620 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a1P61620 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a1P61620 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a1P61620 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a1P61620 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.73□□□□□ -0.53
Sec61a1P61620 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Sec61a1P61620 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Sec61a1P61620 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a1P61620 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a1P61620 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a1P61620 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Sec61a1P61620 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a1P61620 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a1P61620 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a1P61620 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a1P61620 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms