Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Hmga1P17095 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmga1P17095 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Hmga1P17095 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hmga1P17095 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmga1P17095 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmga1P17095 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hmga1P17095 Snord83b-201ENSMUST00000104546 94 ntBASIC13.53□□□□□ -0.24
Hmga1P17095 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.53□□□□□ -0.24
Hmga1P17095 Gm13786-201ENSMUST00000122371 333 ntBASIC13.53□□□□□ -0.24
Hmga1P17095 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hmga1P17095 Gm17208-201ENSMUST00000168388 535 ntBASIC13.53□□□□□ -0.24
Hmga1P17095 Gm3890-201ENSMUST00000182416 207 ntBASIC13.53□□□□□ -0.24
Hmga1P17095 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.53□□□□□ -0.24
Hmga1P17095 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.53□□□□□ -0.24
Hmga1P17095 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.53□□□□□ -0.24
Hmga1P17095 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hmga1P17095 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.53□□□□□ -0.24
Hmga1P17095 Gm32025-201ENSMUST00000217960 307 ntBASIC13.53□□□□□ -0.24
Hmga1P17095 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Hmga1P17095 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hmga1P17095 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmga1P17095 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.53□□□□□ -0.24
Hmga1P17095 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmga1P17095 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.53□□□□□ -0.24
Hmga1P17095 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmga1P17095 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Hmga1P17095 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmga1P17095 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.53□□□□□ -0.24
Hmga1P17095 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hmga1P17095 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.53□□□□□ -0.24
Hmga1P17095 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmga1P17095 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hmga1P17095 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hmga1P17095 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Hmga1P17095 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hmga1P17095 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hmga1P17095 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hmga1P17095 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmga1P17095 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmga1P17095 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.52□□□□□ -0.25
Hmga1P17095 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmga1P17095 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Hmga1P17095 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.52□□□□□ -0.25
Hmga1P17095 Olfr284-202ENSMUST00000206647 966 ntBASIC13.52□□□□□ -0.25
Hmga1P17095 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmga1P17095 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.52□□□□□ -0.25
Hmga1P17095 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmga1P17095 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmga1P17095 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.52□□□□□ -0.25
Hmga1P17095 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hmga1P17095 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Hmga1P17095 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hmga1P17095 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.52□□□□□ -0.25
Hmga1P17095 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hmga1P17095 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Hmga1P17095 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Hmga1P17095 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.52□□□□□ -0.25
Hmga1P17095 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmga1P17095 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmga1P17095 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmga1P17095 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmga1P17095 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmga1P17095 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmga1P17095 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmga1P17095 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmga1P17095 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmga1P17095 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmga1P17095 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmga1P17095 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmga1P17095 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmga1P17095 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmga1P17095 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmga1P17095 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmga1P17095 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmga1P17095 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Hmga1P17095 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmga1P17095 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmga1P17095 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmga1P17095 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmga1P17095 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmga1P17095 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmga1P17095 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmga1P17095 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmga1P17095 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Hmga1P17095 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmga1P17095 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmga1P17095 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmga1P17095 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Hmga1P17095 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.51□□□□□ -0.25
Hmga1P17095 Gm14723-201ENSMUST00000118686 215 ntBASIC13.51□□□□□ -0.25
Hmga1P17095 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.51□□□□□ -0.25
Hmga1P17095 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.51□□□□□ -0.25
Hmga1P17095 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Hmga1P17095 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmga1P17095 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Hmga1P17095 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmga1P17095 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmga1P17095 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmga1P17095 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms