Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ApoeP08226 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ApoeP08226 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
ApoeP08226 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
ApoeP08226 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
ApoeP08226 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
ApoeP08226 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
ApoeP08226 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
ApoeP08226 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
ApoeP08226 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.58□□□□□ -0.4
ApoeP08226 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
ApoeP08226 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ApoeP08226 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
ApoeP08226 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
ApoeP08226 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ApoeP08226 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ApoeP08226 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
ApoeP08226 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
ApoeP08226 Mir1895-201ENSMUST00000122615 79 ntBASIC12.58□□□□□ -0.4
ApoeP08226 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ApoeP08226 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ApoeP08226 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ApoeP08226 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
ApoeP08226 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ApoeP08226 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ApoeP08226 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ApoeP08226 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ApoeP08226 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ApoeP08226 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
ApoeP08226 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
ApoeP08226 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ApoeP08226 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ApoeP08226 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
ApoeP08226 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ApoeP08226 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ApoeP08226 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ApoeP08226 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ApoeP08226 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.57□□□□□ -0.4
ApoeP08226 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.57□□□□□ -0.4
ApoeP08226 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ApoeP08226 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ApoeP08226 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ApoeP08226 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ApoeP08226 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.57□□□□□ -0.4
ApoeP08226 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ApoeP08226 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ApoeP08226 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ApoeP08226 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.57□□□□□ -0.4
ApoeP08226 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ApoeP08226 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.57□□□□□ -0.4
ApoeP08226 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ApoeP08226 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ApoeP08226 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ApoeP08226 Gm13365-201ENSMUST00000121188 973 ntBASIC12.57□□□□□ -0.4
ApoeP08226 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.57□□□□□ -0.4
ApoeP08226 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
ApoeP08226 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ApoeP08226 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.57□□□□□ -0.4
ApoeP08226 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.57□□□□□ -0.4
ApoeP08226 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.57□□□□□ -0.4
ApoeP08226 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
ApoeP08226 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ApoeP08226 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ApoeP08226 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ApoeP08226 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.57□□□□□ -0.4
ApoeP08226 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ApoeP08226 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.57□□□□□ -0.4
ApoeP08226 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.57□□□□□ -0.4
ApoeP08226 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
ApoeP08226 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.57□□□□□ -0.4
ApoeP08226 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ApoeP08226 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.57□□□□□ -0.4
ApoeP08226 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.57□□□□□ -0.4
ApoeP08226 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ApoeP08226 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ApoeP08226 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ApoeP08226 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ApoeP08226 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
ApoeP08226 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.56□□□□□ -0.4
ApoeP08226 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ApoeP08226 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.56□□□□□ -0.4
ApoeP08226 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ApoeP08226 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ApoeP08226 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ApoeP08226 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ApoeP08226 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
ApoeP08226 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
ApoeP08226 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ApoeP08226 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ApoeP08226 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
ApoeP08226 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ApoeP08226 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
ApoeP08226 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
ApoeP08226 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.56□□□□□ -0.4
ApoeP08226 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.56□□□□□ -0.4
ApoeP08226 Gm15393-201ENSMUST00000120499 219 ntBASIC12.56□□□□□ -0.4
ApoeP08226 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.56□□□□□ -0.4
ApoeP08226 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ApoeP08226 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.56□□□□□ -0.4
ApoeP08226 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms