Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.12■□□□□ 0.33
RB1P06400 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.12■□□□□ 0.33
RB1P06400 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.12■□□□□ 0.33
RB1P06400 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.12■□□□□ 0.33
RB1P06400 AC103810.3-201ENST00000583567 96 ntBASIC17.12■□□□□ 0.33
RB1P06400 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.12■□□□□ 0.33
RB1P06400 AL158212.4-201ENST00000624062 1286 ntBASIC17.12■□□□□ 0.33
RB1P06400 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RB1P06400 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.12■□□□□ 0.33
RB1P06400 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.12■□□□□ 0.33
RB1P06400 LINC01144-201ENST00000626198 1710 ntBASIC17.12■□□□□ 0.33
RB1P06400 AC005622.1-201ENST00000636801 1703 ntBASIC17.12■□□□□ 0.33
RB1P06400 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.12■□□□□ 0.33
RB1P06400 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RB1P06400 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RB1P06400 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RB1P06400 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RB1P06400 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
RB1P06400 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RB1P06400 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RB1P06400 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RB1P06400 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.12■□□□□ 0.33
RB1P06400 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
RB1P06400 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.11■□□□□ 0.33
RB1P06400 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RB1P06400 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.11■□□□□ 0.33
RB1P06400 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RB1P06400 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RB1P06400 LETM1P2-201ENST00000597330 2178 ntBASIC17.11■□□□□ 0.33
RB1P06400 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.11■□□□□ 0.33
RB1P06400 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RB1P06400 AC004987.2-201ENST00000395959 1148 ntBASIC17.11■□□□□ 0.33
RB1P06400 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.11■□□□□ 0.33
RB1P06400 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.11■□□□□ 0.33
RB1P06400 RPL7P3-201ENST00000441388 714 ntBASIC17.11■□□□□ 0.33
RB1P06400 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.11■□□□□ 0.33
RB1P06400 PTP4A1P2-201ENST00000546033 454 ntBASIC17.11■□□□□ 0.33
RB1P06400 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.11■□□□□ 0.33
RB1P06400 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.11■□□□□ 0.33
RB1P06400 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.11■□□□□ 0.33
RB1P06400 BRI3BPP1-201ENST00000594224 787 ntBASIC17.11■□□□□ 0.33
RB1P06400 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RB1P06400 LINC01115-203ENST00000606068 577 ntBASIC17.11■□□□□ 0.33
RB1P06400 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RB1P06400 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RB1P06400 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
RB1P06400 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.11■□□□□ 0.33
RB1P06400 PCGF3-213ENST00000620529 1899 ntBASIC17.11■□□□□ 0.33
RB1P06400 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RB1P06400 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RB1P06400 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.11■□□□□ 0.33
RB1P06400 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RB1P06400 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RB1P06400 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RB1P06400 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RB1P06400 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RB1P06400 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RB1P06400 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
RB1P06400 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RB1P06400 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RB1P06400 AC006538.1-201ENST00000567905 1585 ntBASIC17.11■□□□□ 0.33
RB1P06400 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RB1P06400 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.1■□□□□ 0.33
RB1P06400 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RB1P06400 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RB1P06400 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RB1P06400 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RB1P06400 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RB1P06400 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RB1P06400 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RB1P06400 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RB1P06400 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RB1P06400 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.1■□□□□ 0.33
RB1P06400 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.1■□□□□ 0.33
RB1P06400 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.1■□□□□ 0.33
RB1P06400 RPL13P2-201ENST00000440687 659 ntBASIC17.1■□□□□ 0.33
RB1P06400 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.1■□□□□ 0.33
RB1P06400 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.1■□□□□ 0.33
RB1P06400 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RB1P06400 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.1■□□□□ 0.33
RB1P06400 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.1■□□□□ 0.33
RB1P06400 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RB1P06400 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RB1P06400 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RB1P06400 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RB1P06400 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RB1P06400 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RB1P06400 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RB1P06400 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.1■□□□□ 0.33
RB1P06400 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RB1P06400 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RB1P06400 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RB1P06400 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RB1P06400 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RB1P06400 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RB1P06400 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RB1P06400 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RB1P06400 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RB1P06400 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RB1P06400 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms