Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pde6dO55057 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC10.48□□□□□ -0.73
Pde6dO55057 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pde6dO55057 Gm10686-201ENSMUST00000215389 3247 ntBASIC10.48□□□□□ -0.73
Pde6dO55057 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC10.48□□□□□ -0.73
Pde6dO55057 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pde6dO55057 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.48□□□□□ -0.73
Pde6dO55057 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pde6dO55057 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pde6dO55057 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Pde6dO55057 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pde6dO55057 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Pde6dO55057 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pde6dO55057 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pde6dO55057 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pde6dO55057 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pde6dO55057 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pde6dO55057 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pde6dO55057 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Pde6dO55057 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pde6dO55057 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pde6dO55057 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Pde6dO55057 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC10.48□□□□□ -0.73
Pde6dO55057 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pde6dO55057 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pde6dO55057 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pde6dO55057 Gm7461-201ENSMUST00000058918 827 ntBASIC10.48□□□□□ -0.73
Pde6dO55057 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pde6dO55057 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pde6dO55057 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pde6dO55057 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pde6dO55057 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pde6dO55057 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pde6dO55057 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.48□□□□□ -0.73
Pde6dO55057 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pde6dO55057 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pde6dO55057 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pde6dO55057 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pde6dO55057 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pde6dO55057 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pde6dO55057 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pde6dO55057 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pde6dO55057 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pde6dO55057 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pde6dO55057 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pde6dO55057 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Pde6dO55057 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.48□□□□□ -0.73
Pde6dO55057 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pde6dO55057 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
Pde6dO55057 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pde6dO55057 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pde6dO55057 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pde6dO55057 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pde6dO55057 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Pde6dO55057 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC10.47□□□□□ -0.73
Pde6dO55057 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Pde6dO55057 Matn2-203ENSMUST00000226766 3252 ntBASIC10.47□□□□□ -0.73
Pde6dO55057 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pde6dO55057 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pde6dO55057 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Pde6dO55057 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC10.47□□□□□ -0.73
Pde6dO55057 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pde6dO55057 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Pde6dO55057 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pde6dO55057 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Pde6dO55057 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pde6dO55057 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Pde6dO55057 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC10.47□□□□□ -0.73
Pde6dO55057 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Pde6dO55057 Gm5364-201ENSMUST00000216789 889 ntBASIC10.47□□□□□ -0.73
Pde6dO55057 AC131997.1-201ENSMUST00000228611 1229 ntBASIC10.47□□□□□ -0.73
Pde6dO55057 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pde6dO55057 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pde6dO55057 Rps4l-201ENSMUST00000071745 943 ntBASIC10.47□□□□□ -0.73
Pde6dO55057 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Pde6dO55057 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pde6dO55057 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pde6dO55057 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.47□□□□□ -0.73
Pde6dO55057 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pde6dO55057 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
Pde6dO55057 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pde6dO55057 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pde6dO55057 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pde6dO55057 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pde6dO55057 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pde6dO55057 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pde6dO55057 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Pde6dO55057 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Pde6dO55057 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pde6dO55057 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Pde6dO55057 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pde6dO55057 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Pde6dO55057 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pde6dO55057 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pde6dO55057 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Pde6dO55057 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.46□□□□□ -0.73
Pde6dO55057 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pde6dO55057 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pde6dO55057 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Pde6dO55057 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms