Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ccdc180J3QNE4 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC23.86■■□□□ 1.41
Ccdc180J3QNE4 Gm6652-201ENSMUST00000186414 1070 ntBASIC23.86■■□□□ 1.41
Ccdc180J3QNE4 Gm19931-201ENSMUST00000198920 368 ntBASIC23.86■■□□□ 1.41
Ccdc180J3QNE4 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC23.86■■□□□ 1.41
Ccdc180J3QNE4 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ccdc180J3QNE4 Gm19994-201ENSMUST00000217086 586 ntBASIC23.86■■□□□ 1.41
Ccdc180J3QNE4 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Ccdc180J3QNE4 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ccdc180J3QNE4 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ccdc180J3QNE4 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Ccdc180J3QNE4 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ccdc180J3QNE4 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ccdc180J3QNE4 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ccdc180J3QNE4 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ccdc180J3QNE4 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC23.85■■□□□ 1.41
Ccdc180J3QNE4 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC23.85■■□□□ 1.41
Ccdc180J3QNE4 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC23.85■■□□□ 1.41
Ccdc180J3QNE4 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC23.85■■□□□ 1.41
Ccdc180J3QNE4 AC123665.1-201ENSMUST00000228204 438 ntBASIC23.85■■□□□ 1.41
Ccdc180J3QNE4 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Ccdc180J3QNE4 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ccdc180J3QNE4 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc180J3QNE4 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc180J3QNE4 Gm5846-201ENSMUST00000193146 1414 ntBASIC23.84■■□□□ 1.41
Ccdc180J3QNE4 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Ccdc180J3QNE4 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc180J3QNE4 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc180J3QNE4 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc180J3QNE4 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc180J3QNE4 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc180J3QNE4 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc180J3QNE4 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc180J3QNE4 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc180J3QNE4 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc180J3QNE4 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc180J3QNE4 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc180J3QNE4 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC23.84■■□□□ 1.41
Ccdc180J3QNE4 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc180J3QNE4 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc180J3QNE4 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc180J3QNE4 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc180J3QNE4 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc180J3QNE4 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc180J3QNE4 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ccdc180J3QNE4 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
Ccdc180J3QNE4 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
Ccdc180J3QNE4 Gm24845-201ENSMUST00000158034 109 ntBASIC23.83■■□□□ 1.41
Ccdc180J3QNE4 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC23.83■■□□□ 1.41
Ccdc180J3QNE4 Gm8712-201ENSMUST00000221090 701 ntBASIC23.83■■□□□ 1.41
Ccdc180J3QNE4 Gm8385-201ENSMUST00000058999 643 ntBASIC23.83■■□□□ 1.41
Ccdc180J3QNE4 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC23.83■■□□□ 1.41
Ccdc180J3QNE4 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ccdc180J3QNE4 Gm44094-201ENSMUST00000204703 2030 ntBASIC23.83■■□□□ 1.41
Ccdc180J3QNE4 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Ccdc180J3QNE4 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ccdc180J3QNE4 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ccdc180J3QNE4 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ccdc180J3QNE4 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
Ccdc180J3QNE4 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC23.83■■□□□ 1.4
Ccdc180J3QNE4 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Ccdc180J3QNE4 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC23.83■■□□□ 1.4
Ccdc180J3QNE4 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC23.83■■□□□ 1.4
Ccdc180J3QNE4 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
Ccdc180J3QNE4 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Ccdc180J3QNE4 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccdc180J3QNE4 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccdc180J3QNE4 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccdc180J3QNE4 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Ccdc180J3QNE4 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccdc180J3QNE4 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccdc180J3QNE4 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccdc180J3QNE4 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccdc180J3QNE4 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccdc180J3QNE4 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccdc180J3QNE4 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccdc180J3QNE4 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Ccdc180J3QNE4 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Ccdc180J3QNE4 Gm18734-201ENSMUST00000172937 808 ntBASIC23.82■■□□□ 1.4
Ccdc180J3QNE4 Gm37986-201ENSMUST00000193285 383 ntBASIC23.82■■□□□ 1.4
Ccdc180J3QNE4 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC23.82■■□□□ 1.4
Ccdc180J3QNE4 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccdc180J3QNE4 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccdc180J3QNE4 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccdc180J3QNE4 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccdc180J3QNE4 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Ccdc180J3QNE4 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccdc180J3QNE4 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccdc180J3QNE4 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccdc180J3QNE4 Gm14277-201ENSMUST00000121195 360 ntBASIC23.81■■□□□ 1.4
Ccdc180J3QNE4 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Ccdc180J3QNE4 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC23.81■■□□□ 1.4
Ccdc180J3QNE4 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccdc180J3QNE4 AC165260.3-202ENSMUST00000224550 1031 ntBASIC23.81■■□□□ 1.4
Ccdc180J3QNE4 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccdc180J3QNE4 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccdc180J3QNE4 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Ccdc180J3QNE4 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccdc180J3QNE4 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccdc180J3QNE4 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms